Bordetella sp. J329: CBF45_00840
Help
Entry
CBF45_00840 CDS
T05850
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
boj
Bordetella sp. J329
Pathway
boj00260
Glycine, serine and threonine metabolism
boj00460
Cyanoamino acid metabolism
boj00630
Glyoxylate and dicarboxylate metabolism
boj00670
One carbon pool by folate
boj00680
Methane metabolism
boj01100
Metabolic pathways
boj01110
Biosynthesis of secondary metabolites
boj01120
Microbial metabolism in diverse environments
boj01200
Carbon metabolism
boj01230
Biosynthesis of amino acids
boj01240
Biosynthesis of cofactors
boj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
boj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CBF45_00840 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CBF45_00840 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CBF45_00840 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CBF45_00840 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CBF45_00840 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CBF45_00840 (glyA)
Enzymes [BR:
boj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CBF45_00840 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DUF2254
Motif
Other DBs
NCBI-ProteinID:
AZV92448
LinkDB
All DBs
Position
198275..199519
Genome browser
AA seq
414 aa
AA seq
DB search
MFDRTRTLDKVDPELWDAIQKEDVRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYP
GKRYYGGCEFVDIVEQLAIDRLKELFGAEAANVQPNSGSQANQGVYNAVLKPGDSVLGMS
LAEGGHLTHGASVNSSGKLYNFHQYGLDANEVLNYEQVEALAREHKPKLIVAGASAYSLH
IDFERLARIAHENGALLMVDIAHYAGLVAGGAYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAEFEKAVNSAIFPGIQGGPLEHVIAAKAVAFKEALDPSFRDYAAQVVKNAKVMAETLV
KRGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGQAHITVNKNAIPNDPEKPFVTSGIR
LGTPAITTRGFGEAEAELTANLIADVLDNPHDADNIAKVRARVSELTARLPVYK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcgcactcgtacccttgataaggtcgaccccgaactgtgggacgccatccag
aaggaagacgtccgccaggaacagcacatcgagctgattgcttcggaaaactatgccagc
ccggcggtgatgcaggcccagggtacgcagctgaccaacaaatatgcggaaggttatccc
ggcaagcgctactacggtggttgcgaattcgtcgacatcgtcgaacagctggccatcgac
cgcctgaaggaactctttggcgctgaagcggcgaatgtgcagcccaattccggctcccag
gccaaccagggcgtctacaacgccgtcctgaagccgggcgactccgtcctgggcatgagc
ctggccgaaggcggccacctgacccacggcgccagcgtcaattcctccggcaaactgtac
aacttccatcagtacggcctggatgccaatgaagtcctgaactacgaacaggtcgaagcc
ctggcgcgcgaacacaagcccaagctgatcgtggctggcgcgtccgcctactcgctgcac
atcgacttcgagcgcctggcccgcatcgctcatgaaaatggcgcgctgctgatggttgac
atcgcccactacgccggcttggtcgccggtggcgcgtaccctaacccggtaccgcacgcc
gacttcgtgacgtctaccacgcacaagtcgctgcgcggcccgcgcggtggcgtgatcatg
atgaaggccgaattcgaaaaggctgtcaattctgcaattttccccggcatccaggggggg
cccctggagcacgtcattgccgccaaggccgtggctttcaaggaagcgctggatccttcc
ttccgtgactacgccgcccaggtcgtcaagaatgccaaggtcatggcggaaacgctggtc
aagcgtggtctgcgcatcgtgtccggccgtaccgaaagccacgtcatgctggttgatctg
cgcgccaagggcatcaccggcaaggaagccgaagcggtgctgggccaggcccacatcacg
gtgaacaagaacgccattcccaacgatccggaaaagccgttcgttaccagcggcatccgt
ttgggtacgccggccatcaccacgcgtggttttggcgaggccgaagccgaactgaccgcc
aacctgatcgccgacgtgctcgacaatccgcatgacgccgataacatcgccaaggtgcgc
gcgcgcgtcagcgagctgacggcccgcctgccggtctacaaataa
DBGET
integrated database retrieval system