KEGG   Bordetella sp. J329: CBF45_03150
Entry
CBF45_03150       CDS       T05850                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
boj  Bordetella sp. J329
Pathway
boj02020  Two-component system
Brite
KEGG Orthology (KO) [BR:boj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CBF45_03150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boj03021]
    CBF45_03150
Transcription machinery [BR:boj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CBF45_03150
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_24 GerE RUS6_N PhnG DUF6362
Other DBs
NCBI-ProteinID: AZV92844
LinkDB
Position
711371..711877
AA seq 168 aa
MIPGSTAGKDALQALYASHYGWLVGWLKRRVESPMDAADFAQDTFVRLLARERPLDQDRE
PRALLAHIAKALLVDHWRHRAVEQAFLDALMAQPEPLVSSPEEIALVREALMRIDAMLAS
MPEKTRVIFLLSRIDGLKYAEIGERLGMAEITVKRHMRRAWIACLELA
NT seq 507 nt   +upstreamnt  +downstreamnt
atgattccaggttccacggcaggcaaggatgccttgcaggcgctctatgccagccattat
ggctggctggtcggctggttgaaacgccgtgtggaatcgccgatggacgccgctgatttc
gcccaggacacctttgtgcgcctgctggcgcgtgagcgtccgctggatcaggaccgcgaa
ccccgcgccttgctggcccatatcgccaaggccttgctggtcgatcattggcgtcaccgg
gcggtcgaacaggcttttctcgatgccctgatggcgcaacctgagccgctggtgtcctcg
ccggaagagatcgcgctggtgcgggaagccctgatgcgcatagatgccatgctggccagc
atgccggagaaaacccgcgtgatctttctgctgtcccgcattgatggcctcaagtacgcg
gagataggcgaacgcttgggcatggcggaaattaccgtcaagcggcatatgcgccgggcc
tggattgcctgcctggagctggcgtga

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