Bordetella sp. J329: CBF45_03150
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Entry
CBF45_03150 CDS
T05850
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
boj
Bordetella sp. J329
Pathway
boj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
boj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CBF45_03150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boj03021
]
CBF45_03150
Transcription machinery [BR:
boj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CBF45_03150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
GerE
RUS6_N
PhnG
DUF6362
Motif
Other DBs
NCBI-ProteinID:
AZV92844
LinkDB
All DBs
Position
711371..711877
Genome browser
AA seq
168 aa
AA seq
DB search
MIPGSTAGKDALQALYASHYGWLVGWLKRRVESPMDAADFAQDTFVRLLARERPLDQDRE
PRALLAHIAKALLVDHWRHRAVEQAFLDALMAQPEPLVSSPEEIALVREALMRIDAMLAS
MPEKTRVIFLLSRIDGLKYAEIGERLGMAEITVKRHMRRAWIACLELA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgattccaggttccacggcaggcaaggatgccttgcaggcgctctatgccagccattat
ggctggctggtcggctggttgaaacgccgtgtggaatcgccgatggacgccgctgatttc
gcccaggacacctttgtgcgcctgctggcgcgtgagcgtccgctggatcaggaccgcgaa
ccccgcgccttgctggcccatatcgccaaggccttgctggtcgatcattggcgtcaccgg
gcggtcgaacaggcttttctcgatgccctgatggcgcaacctgagccgctggtgtcctcg
ccggaagagatcgcgctggtgcgggaagccctgatgcgcatagatgccatgctggccagc
atgccggagaaaacccgcgtgatctttctgctgtcccgcattgatggcctcaagtacgcg
gagataggcgaacgcttgggcatggcggaaattaccgtcaagcggcatatgcgccgggcc
tggattgcctgcctggagctggcgtga
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integrated database retrieval system