Bordetella sp. J329: CBF45_13185
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Entry
CBF45_13185 CDS
T05850
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
boj
Bordetella sp. J329
Pathway
boj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBF45_13185
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boj01007
]
CBF45_13185
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boj03016
]
CBF45_13185
Enzymes [BR:
boj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CBF45_13185
Amino acid related enzymes [BR:
boj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CBF45_13185
Transfer RNA biogenesis [BR:
boj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBF45_13185
Prokaryotic type
CBF45_13185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Baculo_PEP_C
ZapB
DUF1664
DUF7801
FapA
ADIP
FlxA
NPV_P10
PCRF
OVT1
SKA1
TMF_TATA_bd
ERM_helical
Motif
Other DBs
NCBI-ProteinID:
AZV94561
LinkDB
All DBs
Position
complement(2974990..2976309)
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AA seq
439 aa
AA seq
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MLEPTLLRKDLPAIVERLSSRGFSFDVERFNALEGRRKSLQMETENLQARRNALAKQIGQ
LKAKGEDASTVLAESQQIPAQLKALEDELGNLQQDLNALLLAVPNLPHESVPQGRDSDEN
VEVRRWLPGAAAADGRPAPLPFAPRDHVELGAPLGLDFETAAKLSGSRFAFMRGPVARLH
RALSQFMLDLQTQQHGYTECYTPYIVQSPTLFGTGQLPKFKDDMFWVTKGGQEDGTAEDL
YLISTSEITLTGSVRDEILAADQLPLKLTAHSPCFRSEAGSGGRDTRGMIRQHQFDKVEM
VQITDPDASYQALEEMVGHAEHVLQALELPYRVVLLCTGDMGFSAAKTYDLEVWLPAQDT
WREISSVSNCEAFQARRLQARVRRQEKGKPEYVHTLNGSGLAVGRALVAVLENHQQEDGS
IRVPAALRPYVGGLEVLQA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgctagagcccaccctgctgcgtaaagatttgcctgccatcgtcgaacgcctgtcgtcg
cgtggcttctccttcgatgtcgagcgcttcaatgcgctggaaggccgccgcaaatccctg
caaatggaaaccgagaacctgcaggcgcgccgcaatgcgctggccaagcagatcggccag
ctcaaggccaagggcgaagatgccagcacggtgctggccgagtcacagcagattccggcc
cagctgaaggcgctggaagatgaactgggcaacctgcagcaggatctcaatgcgttgttg
ctggccgtgcccaacctgccgcatgaaagcgtgccgcaaggcagggacagcgacgaaaac
gtcgaagtgcgtcgttggctgccgggagctgccgcggctgatggccgtccggcgccgctg
cctttcgcgccgcgcgaccacgttgaactgggcgcaccgctgggcctggatttcgaaacg
gccgccaagctgtcgggttcgcgcttcgcctttatgcgcggccctgtggcacgcctgcat
cgtgcattgtcgcaattcatgctggacctgcagacgcagcagcatggctataccgaatgc
tatacgccgtacatcgtgcaaagcccgacgctgttcggcacaggccagttgcccaagttc
aaggatgacatgttctgggtgaccaagggcggccaggaagatggaacggccgaagacctc
tacctgatctcgacctcggaaatcacgctgaccggctcggtgcgcgatgaaatcctggct
gcagaccagctgccgctgaaactgacggcccattcgccctgctttcgttcggaagcgggc
agcggcggccgcgatacgcgcggcatgatccgccagcaccagttcgacaaggtcgaaatg
gtgcagatcaccgacccggatgcttcctaccaggctttggaagaaatggtcggtcatgcc
gagcatgtgttgcaggccctggaattgccataccgcgtggtgctgctgtgcaccggcgac
atgggtttctccgctgccaaaacctatgacctggaggtctggctgccggcgcaggatacc
tggcgtgaaatttcgtcggtgtcgaactgcgaagcctttcaggcgcgccgtttgcaggcg
cgtgtgcgccgccaggagaagggcaagcccgaatacgtgcacaccctcaatggttccggc
ttggccgtgggccgtgcgctggtggccgtactggaaaaccaccaacaggaagatggttcc
atccgagtgcctgccgcgctgcgtccgtacgtcggcggcctggaagttctgcaagcctga
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