Bordetella sp. J329: CBF45_13860
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Entry
CBF45_13860 CDS
T05850
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
boj
Bordetella sp. J329
Brite
KEGG Orthology (KO) [BR:
boj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boj03009
]
CBF45_13860
Enzymes [BR:
boj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CBF45_13860
Ribosome biogenesis [BR:
boj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CBF45_13860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AZV94672
LinkDB
All DBs
Position
complement(3126451..3127437)
Genome browser
AA seq
328 aa
AA seq
DB search
MSESPVVRLVEVTEEHAGQRLDNFLLRMCKGVPKSHIYKAIRGGQVRINKGRCSADSRLE
PGDTVRIPPFRLPAETAQAPVPGCEFPIVYEDDALLVVDKPAGVAVHGGSGVSFGVIEQL
RAARPQARFLELAHRLDRDTSGLLLVAKKRSALLGLHEMFREGRGRKHYFALVHGDWVNG
RQHIRLPLLKWLTRTGERRVRVDEQEGQAAHTIISLERRYGEVSLVDAELRTGRTHQIRV
HLSASGFPIVGDDKYGDEAADAALVAKGFRRMFLHAHRLEIPHPVSGEALRLVAQLPPEC
ENLLLVLDKASGTGGAPAQGQPRRTGKY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatcaccagtggtgcgcctcgtcgaggtgaccgaagaacatgcgggccagcgt
ctggataactttcttttgcgcatgtgcaaaggggtgccgaaaagccatatctacaaggcc
atacgcggtggccaggtacggatcaacaagggccgttgcagcgctgacagccgcctggaa
ccgggcgacaccgtgcgcattccgccctttcgcctgccggccgaaacggcccaggcgccg
gtgccgggctgcgagtttcccatcgtctatgaagatgacgcgctgctggtggtcgacaag
ccggcaggggtggcggtgcatggcggcagcggcgtttcctttggcgtcatcgaacaactg
cgcgccgcgcggccgcaggcgcggttcctggagctcgcccaccgcctggaccgcgatacc
tcgggcctgttgctggtggcgaaaaaacgcagcgcgctgctggggttgcacgaaatgttc
cgcgaagggcggggacgcaagcattatttcgcgctggtgcacggcgattgggtcaacggc
cgccagcatatccgcctgcctttgctgaaatggctgacgcgtaccggtgagcgccgcgtg
cgggtcgatgagcaagaaggtcaggccgcccataccatcatcagcctggagcgccgctat
ggcgaggtctccctggtggatgcggaactgcgcaccggacgcacgcaccagatccgggtg
catctttcggccagcggctttcccatcgtgggcgacgacaaatatggcgacgaggcagcc
gacgcggcgctcgtggccaagggcttccgacgcatgttcctgcatgctcaccggctggag
attccccatccggtgagcggcgaagccctgcgcctggtagcgcaattgccaccagaatgt
gagaatctccttcttgtgctggacaaggcgtccggtacaggcggtgcgcctgcccaaggc
cagcctcgccgcaccgggaaatattga
DBGET
integrated database retrieval system
