Bordetella sp. J329: CBF45_15430
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Entry
CBF45_15430 CDS
T05850
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
boj
Bordetella sp. J329
Pathway
boj03030
DNA replication
boj03430
Mismatch repair
boj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBF45_15430
03430 Mismatch repair
CBF45_15430
03440 Homologous recombination
CBF45_15430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boj03032
]
CBF45_15430
03400 DNA repair and recombination proteins [BR:
boj03400
]
CBF45_15430
Enzymes [BR:
boj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBF45_15430
DNA replication proteins [BR:
boj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBF45_15430
DNA repair and recombination proteins [BR:
boj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBF45_15430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AZV94933
LinkDB
All DBs
Position
complement(3490800..3491543)
Genome browser
AA seq
247 aa
AA seq
DB search
MRLIVLDTETTGLEPAQGHRIVEIGAVEVDNRMVTDNYYHQYLNPDRDSDPEALAVHGLT
TEFLSGHPRFEEVARDFVEFIRDGELLIHNAAFDIKFLDAELQRVGLGKVRDYCAKVTDS
LMVAREMHPGKRNSLDALCDRYGISNAHRTLHGALLDTRLLAEVWLAMTRGQESLLGDVD
AADNQASGNAIQFRSGSDDFDPSRLAVLPAGADEIQAHADYLAALDKAVKGECVWRRYEP
QSEAAQS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgatcgtactggataccgaaaccaccggcctggaaccggcgcaagggcatcgc
atcgttgaaatcggtgccgtggaggtcgataaccgcatggttaccgacaactactaccat
caatatctgaatcccgaccgcgacagcgaccccgaggccctggcggtgcacggcttgacc
acggagttcctgtccggccatccccgtttcgaggaagtggccagggatttcgtggagttc
atccgcgacggcgagctgttgatccataacgcggcctttgacatcaagttcctcgatgcc
gaactgcaacgggtaggcctgggcaaggtgcgggattactgcgccaaggtgacggacagc
ctcatggtggcgcgcgagatgcatccgggcaagcgcaattcgctggatgcgctatgcgac
cgctacggcatttccaatgcgcaccgtacgctgcacggcgccttgctggatacgcgcctg
ctggcggaagtctggctggccatgacgcgtggccaggagtcgctgctgggtgatgtcgat
gctgcggataaccaagccagcggcaacgcgatccagttccgcagcggcagcgacgatttc
gacccgtccaggctggctgtcctgccagcgggcgccgacgagatacaggcgcacgcggat
tacctggcggcgctggacaaggcggtcaagggggagtgcgtctggcggcgctatgaaccg
cagtccgaagctgcgcagtcctga
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