Burkholderia oklahomensis EO147: DM82_1883
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Entry
DM82_1883 CDS
T03284
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bok
Burkholderia oklahomensis EO147
Pathway
bok03410
Base excision repair
bok03430
Mismatch repair
bok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM82_1883 (recJ)
03430 Mismatch repair
DM82_1883 (recJ)
03440 Homologous recombination
DM82_1883 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bok03400
]
DM82_1883 (recJ)
DNA repair and recombination proteins [BR:
bok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DM82_1883 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DM82_1883 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DM82_1883 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AIO66385
UniProt:
A0AAI8B6A6
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All DBs
Position
1:2174549..2176243
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AA seq
564 aa
AA seq
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MTHIVTRSAAPAALDALARHGLHPVLARLYAARGITSPADIETALSRLVPPAQLKGCANA
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGATIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARSASGFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDIGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
HQGVIGIVAGRLKERFHRPAFTFAHADDSGARVKGSGRSIPGFHLRDAIDLISKREPDLI
VTFGGHAMAAGVTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDSAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLMRGRQRFNAIWFNHAEPLPARAT
VAFRLASDTWNGMTRVQLIVEHAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccacatcgtcacccgctcagccgcccccgccgcgctcgacgcgctcgcccgccac
ggactgcatcccgtgctcgcccgcctctatgcggcgcgcgggatcacgtcgcccgccgac
atcgagaccgcgctgtcgcgcctcgtgccgcccgcgcagttgaaaggctgcgccaacgcc
gccgcgctgctcgcggacgcgctcgaggccgggcgcaagatgctcgtcgtcgccgactac
gactgcgacggcgcgaccgcatgcgcggtcgccgtgcgcggcctgagaatgttcggcgcg
acgatcgactacctggtgccgaaccgcttcgagtacggctatggcttgacgcccgagatc
gtcgagctcgccgccgcgcgcaagcccgatctgctgatcaccgtcgacaacgggatcgcg
agcgtcgacggcgtcgcggccgcgaacgcgcgcggcatcgacgtgctcgtcaccgatcat
cacctgcccggcgacacgctgcccgccgcgcgcgcgatcgtcaatccgaaccagccgggc
tgcgcgtttccgagcaagcacatcgcgggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgcgcgcgcggcgcgttcggcgacgcacgccccgagccgcgtctc
gacggcctcctcgacctcgtcgcgctcggcacggtcgccgacgtcgtgcgcctcgacggc
aacaaccgcgtgctcgtcgcgcagggcctgcagcggatccgcaacggccggatgcagccc
ggcatcgcggcgctctttcgcgcggcggcgcgcgaagcgcgcagcgcatccggcttcgac
ctgggcttcggcctcggcccgcgcctgaacgcggcaggccgcctgtcggacatgtcgctc
gggatcgaatgcctgacgaccgacgacatcggccgcgcgtgggagctcgcccagcagctc
gacgcgatgaaccgcgagcggcgcgagatcgaggcgggcatgcagcagcaggcgctcgcc
gatctcgcgtcggtcgacccggccgaagcggcgacgatcacgctcttcaaccccgaatgg
caccagggcgtgatcggcatcgtcgcggggcggctgaaggagcgctttcaccggccggcg
ttcacgttcgcgcacgcggacgacagcggcgcgcgcgtgaagggctcgggccgctcgatc
cccggcttccatctgcgcgacgcgatcgacctgatctcgaaacgcgagcctgatctgatc
gtcacgttcggcggccacgcgatggcggcgggcgtcacgctcgacaccgagaacgtgccg
cgcttcgccgctgcgttcgaggcggtcgcgcgcgaatggctgtccgacgacgcgctcgcg
cgcgtgatcgagacggacggcgatctcgaggacgcgtatttcacgccgcaggtcgtcgag
ctgctcgactccgccgtctggggccagggctttccggcgccgctcttctcgggcgaattc
gacgtggcgtcgcaggcgctcgtcaaggacaagcacctgaagctgcagttgatgcgcggc
cggcagcgcttcaacgcgatctggttcaaccacgccgagccgctgcccgcgcgcgcgacg
gtcgcgttccggctcgcgagcgacacgtggaacggcatgacgcgcgtgcagctgatcgtc
gagcacgcggcgtag
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