Burkholderia oklahomensis EO147: DM82_2049
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Entry
DM82_2049 CDS
T03284
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bok
Burkholderia oklahomensis EO147
Pathway
bok03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DM82_2049 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bok03019
]
DM82_2049 (rnc)
03009 Ribosome biogenesis [BR:
bok03009
]
DM82_2049 (rnc)
03036 Chromosome and associated proteins [BR:
bok03036
]
DM82_2049 (rnc)
Enzymes [BR:
bok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DM82_2049 (rnc)
Messenger RNA biogenesis [BR:
bok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DM82_2049 (rnc)
Ribosome biogenesis [BR:
bok03009
]
Eukaryotic type
90S particles
RNase
DM82_2049 (rnc)
Prokaryotic type
rRNA processing factors
DM82_2049 (rnc)
Chromosome and associated proteins [BR:
bok03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DM82_2049 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AIO67045
UniProt:
A0AAI8B7K2
LinkDB
All DBs
Position
1:complement(2373752..2375131)
Genome browser
AA seq
459 aa
AA seq
DB search
MPLSQLESRLRYEFRNAELLRQALTHRSHSATHNERLEFLGDSVLNCAVAALLFQRFSKL
DEGDLSRVRANLVKQQSLYEIAQALNISDGLRLGEGELRSGGFRRPSILADAFEAIIGAV
FLDGGFEAAQGVIKRLYIPILDHIDPRTLGKDAKTLLQEYLQGHKIALPTYTVVATHGAA
HNQQFEVECTVPKLDVKVSGSGASRRAAEQAAAKKALDEVLAAAPMLAAKPKRSKSARGA
QHVEPEIVPGVKGVQEALDLRSPDRKERGANRVAGGEAKGADPKAVEARSTEAKASAELK
SAEMKAVEAKSGAHASAASSDGLVQADDAAARAPAAAPVAVIRAAHVEHTADKAEPRAAK
PVDKPASTTDKPASDKALEKGPDKAHAQDKEPEKAQDKSPDAVSAKASDKVPDKPDAAAR
VVAGTADRPPRARDASLAPPSAAEPDLAAAPVRVADAGH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcccctatcccagttggaaagccggctgcgctacgaatttcgcaatgcggaattgttg
cgccaggctttgacccatcgcagtcatagcgccacgcataacgaacggctcgagtttctc
ggcgattccgttctgaattgcgcggtggccgcccttttgttccagcgcttcagcaagctg
gacgagggtgacttgtcgcgcgtgcgggcgaacctcgtcaagcagcagtcgctctacgaa
attgctcaggccctcaatatctccgacggcttgcggctcggcgagggcgagctgcgcagc
ggcgggttccgaagaccgtcgatcctcgcggacgcattcgaagccatcatcggggcggtg
ttcctcgatggcggcttcgaagccgcccaaggggttatcaagcggctctacatcccgatt
ctcgaccacatcgatccgcgcacgctcggcaaggacgcgaagacgctgctgcaggagtat
ctgcaggggcacaagatcgcgttgccgacctataccgtcgtcgcgacgcatggtgcagcg
cacaatcagcaattcgaagtcgaatgcacggtgccgaagctggacgtgaaggtgtccggc
tccggcgcgagccgccgcgcggccgagcaggccgccgcgaagaaggcgctcgacgaggtg
ctggcggccgcgccgatgctcgccgcgaagccgaagcgctcgaagagcgcgcgcggcgcg
cagcacgtggagccggaaatcgtgccgggcgtgaagggcgtgcaggaggcgctcgatttg
cgctcgccggatcgcaaggagcgcggcgcgaaccgcgtggcgggcggcgaggcgaagggc
gcggacccgaaggccgtcgaggcgcgctccaccgaagcgaaagcgtcggccgagttgaaa
tccgccgagatgaaagccgtcgaggcgaagtccggcgcgcatgcgagcgccgcttcgtcc
gacgggctcgtgcaggccgacgatgcggctgctcgtgcgcccgctgccgcgcccgtcgcg
gtcatccgtgcggcgcatgtcgagcacacggccgacaaggccgagccgcgcgcggcaaag
ccggtcgacaagcccgcttcgacaacggacaagcccgcgtcggacaaggcgctggaaaaa
ggcccggacaaggcgcacgcccaggacaaggaacccgagaaggcgcaggacaagtcgccc
gacgctgtttccgcgaaggcgtccgacaaggtgccggataagcccgacgccgccgctcgc
gtcgtcgcggggacggccgaccggccgccgcgcgcccgcgacgcgtcgctcgcgccgccg
tccgcagccgagcccgatctggccgccgcgcccgtgcgcgtcgccgatgcgggtcattga
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