Burkholderia oklahomensis EO147: DM82_2195
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Entry
DM82_2195 CDS
T03284
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bok
Burkholderia oklahomensis EO147
Pathway
bok03030
DNA replication
bok03430
Mismatch repair
bok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM82_2195
03430 Mismatch repair
DM82_2195
03440 Homologous recombination
DM82_2195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bok03032
]
DM82_2195
03400 DNA repair and recombination proteins [BR:
bok03400
]
DM82_2195
Enzymes [BR:
bok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM82_2195
DNA replication proteins [BR:
bok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM82_2195
DNA repair and recombination proteins [BR:
bok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM82_2195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIO65118
UniProt:
A0AAI8B300
LinkDB
All DBs
Position
1:complement(2534258..2535475)
Genome browser
AA seq
405 aa
AA seq
DB search
MSASPLLHPAIDTPLAFVDLETTGGSAVEHRITEIGVVVVSADHVSTWTTLVNPRQAIPP
FIQQLTGITDDMVRGAPTFADVASALFERLDGKLFVAHNASFDRGFLRAEFERAGFAFNP
DVLCTVRLSRVLFPRESRHGLDALIARHALTPSARHRALADADLIWQFWQKLHDAIPGEH
LREQIERTTRRFRLAGELTEEHLERAPAGCGVYALFGDNDVPLYVGRSVRVRQRLRALLT
GERRSSKEMRLAQLVRRVEWRETGGELGALLAEADWIASLAPSFNRRPDRSAARPAGDAN
WPFDGPVAFEERGASSVFHVVNRWRYVGAASSIEQAAALAAEASERGADAAPVVRRILQT
HLARGLQLIPLAGAARADAQPTALGPPAVQTCDSAVPSASFWPES
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgccgctgctccaccccgcgatcgacacgccgctcgcgttcgtcgatctc
gaaaccaccggcggctcggccgtcgagcatcgcatcaccgaaatcggcgtcgtcgtcgtg
agcgcggatcacgtgtcgacctggacgacgctcgtcaatccgcggcaggcaatcccgccc
ttcatccagcaactgacaggcatcacggacgacatggtgcgcggcgcgccgacgttcgcc
gacgtcgcgtccgcattgttcgagcgactcgacggcaagctcttcgtggcgcacaacgcg
agcttcgaccgcggttttctgcgcgcggaattcgagcgggcgggttttgcgttcaatccg
gacgtgctctgcacggtgcggctgtcgcgcgtgctctttccgcgcgagtcgcgtcacggg
ctcgacgcgctgatcgcgcgccacgcactcacgccgtcggcgcgccaccgggcgctcgcc
gatgcggatctcatctggcagttctggcagaaattgcacgacgcgataccgggcgagcat
ctgcgtgagcagatcgagcgcacgacgcgccgtttccggctcgcgggcgagttgacggaa
gagcacctggagcgcgcgcctgccggttgcggcgtctatgcgctgttcggcgacaacgat
gtgccgctctacgtgggccgcagcgtccgggtccggcagcggctgcgcgcgctgctgacg
ggcgagcggcgctcgtcgaaggaaatgcggctggcgcaactggttcggcgcgtcgagtgg
cgcgagacgggcggcgagctcggcgcgctgctggccgaggcggactggatcgcttcgctc
gcgccgtcattcaaccggcggcccgaccgcagcgcggcgcgcccggccggcgatgcgaac
tggccgttcgacgggccggttgcgttcgaggagcgcggcgcgtcgagcgtcttccacgtg
gtcaaccgctggcgctacgtcggcgccgcatcatcgatcgagcaggccgcggcgcttgcg
gccgaggcgagcgaacgcggggcggacgccgcgccggtggtgcgccgcattctgcaaacg
catcttgcgcgcgggctgcagctgattccgcttgcgggcgcggcgcgcgccgacgctcag
ccgacggcgcttgggccgcccgccgtgcagacgtgcgacagcgcggtgccgagtgcgtct
ttctggccggaatcgtag
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