Burkholderia oklahomensis EO147: DM82_2857
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Entry
DM82_2857 CDS
T03284
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bok
Burkholderia oklahomensis EO147
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bok03016
]
DM82_2857
Enzymes [BR:
bok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DM82_2857
Transfer RNA biogenesis [BR:
bok03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DM82_2857
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
2H-SAK
Motif
Other DBs
NCBI-ProteinID:
AIO67404
UniProt:
A0AAI8B8F9
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All DBs
Position
1:complement(3249762..3250316)
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AA seq
184 aa
AA seq
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MAGDRLRCFVALTLDRASRDALAALPVAAGARRTSRDQLHVTIAFLGAVERAKSEQLGAR
LAELAAVDAVPTVDVERVVCWPSTAHARLVVAELAPQPQLLALGDRVGGALRELGLPPDS
RAFKPHVTIARFPRDARRVAVDSANDAASGMPLALRFETLTLYESILARPGAEHRVLASA
ALRG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgaccggctgcgctgcttcgtcgcgctcacgctcgatcgggcgtcgcgcgac
gcgctcgcggcgctgcccgtcgccgccggcgcgcggcgtacgtcgcgcgatcaattgcac
gtgacgatcgcgttcctcggcgcggtcgagcgggcgaagagcgagcagctcggcgcgcgc
ctcgccgaactcgcggcggtcgacgcggtgccgaccgtcgacgtcgagcgcgtcgtctgc
tggccgagcaccgcgcatgcgcggctcgtcgtcgcggagctcgcgccgcagccccagttg
ctcgcgctcggcgatcgggtgggcggcgcgttgcgcgagctcggcttgccgcccgacagc
cgtgcgttcaagccgcacgtgacgatcgcgcggtttccgcgcgatgcgcgtcgcgtggcg
gtcgacagcgcgaacgatgccgcaagcggcatgccgctcgcgttgcggttcgaaacgctc
acgctctacgagagcattctcgcgcgcccgggcgccgagcatcgggtgctcgcgtcggcg
gcgctgcgtggatga
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