Burkholderia oklahomensis E0147: DM82_3872
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Entry
DM82_3872 CDS
T03284
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
bok
Burkholderia oklahomensis E0147
Pathway
bok02020
Two-component system
bok02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DM82_3872
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DM82_3872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bok03021
]
DM82_3872
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bok02035
]
DM82_3872
Transcription machinery [BR:
bok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DM82_3872
Bacterial motility proteins [BR:
bok02035
]
Flagellar system
Flagellar assembly proteins
Stator
DM82_3872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
SIMPL
Sigma70_ECF
GerE
HTH_38
HTH_37
Phage_antitermQ
HTH_23
DUF2551
MerR-DNA-bind
Motif
Other DBs
NCBI-ProteinID:
AIO70392
LinkDB
All DBs
Position
2:complement(136868..137578)
Genome browser
AA seq
236 aa
AA seq
DB search
MPTHIEHATPSAAYVGANATVEQRWLIEYAPLVKRVARQLGSQANGVIALEDMEQIGLMG
LLEALRRYGSPDEAFAGYAALRVRGAILDELRRHDWRPRAVRNAAHRARDCERALCRTLG
RVPTAGEVSASLGIGIDEYRENVMANRAEAMASFDEMLDADWLAHDDNPERQVVLRRCLE
QALTSLDEREQRVIQLYYEFDLSLREIAAVLELTEARVCQINKAALRKMRAALSDG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcacatcgagcacgcgacgccgtccgccgcctatgtcggggcgaacgcgacc
gtcgagcaacgctggctgatcgaatatgcgccgctcgtgaagcgtgtggcgcgccagctt
ggttcgcaggcgaacggggtgatcgcgctggaggacatggagcagatcggtctcatgggc
ctgctcgaggcattgcgccgctatggctcgcccgacgaggcgttcgcgggatatgcggcg
ttgcgcgttcgcggcgcgattctcgacgaattgcgacggcacgattggcggccgcgcgcg
gtgcgcaacgccgcgcaccgcgcgcgcgattgcgagcgggcgctgtgtcgcacgctcggg
cgcgtaccgacggcgggcgaagtgagcgcgtcgctcggcatcggcatcgatgagtatcgc
gaaaacgtcatggcgaaccgggcggaagcgatggcgagcttcgacgaaatgctcgacgcc
gactggctcgcgcacgacgacaacccggagcgccaggtggtgctgcgtcgctgtctcgaa
caggcgttgacgagcctcgacgaacgcgagcagcgcgtcattcagctgtactacgagttc
gacctgagcctgcgcgaaatcgccgccgtgctcgagctcaccgaagcgcgcgtatgtcag
atcaacaaggcggcgctcaggaaaatgcgcgccgcgttgagcgacggctag
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