Burkholderia oklahomensis EO147: DM82_5633
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Entry
DM82_5633 CDS
T03284
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
bok
Burkholderia oklahomensis EO147
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bok03032
]
DM82_5633 (hup)
03036 Chromosome and associated proteins [BR:
bok03036
]
DM82_5633 (hup)
03400 DNA repair and recombination proteins [BR:
bok03400
]
DM82_5633 (hup)
DNA replication proteins [BR:
bok03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DM82_5633 (hup)
Chromosome and associated proteins [BR:
bok03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DM82_5633 (hup)
DNA repair and recombination proteins [BR:
bok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DM82_5633 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
PT-TG
Motif
Other DBs
NCBI-ProteinID:
AIO69319
UniProt:
A0AAI8FQL6
LinkDB
All DBs
Position
2:complement(2249102..2249380)
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AA seq
92 aa
AA seq
DB search
MNKQELIDAVAAGAGVSKSDASKTVQAVLDAITDAVSRDEAVQLVGFGAFSRGQRSARTG
RNPTTGEEIAIAAANTVKFTAGKAFKDAVNES
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaggaactcatcgacgcagtcgccgcgggcgcgggcgtcagcaaaagcgac
gcgagtaaaaccgtccaggcggtgttggatgcgatcacggacgcggtgagccgcgacgaa
gcggtgcagcttgtcggttttggggcgttttcgcgggggcagcgctcggcgcgtaccggt
cgcaatccgacgacgggcgaggagatcgccattgccgcggcaaatactgtgaagttcacg
gccggcaaggcgtttaaggacgcggtgaacgaatcgtga
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