Burkholderia oklahomensis EO147: DM82_6030
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Entry
DM82_6030 CDS
T03284
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bok
Burkholderia oklahomensis EO147
Pathway
bok02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DM82_6030 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bok03021
]
DM82_6030 (rpoD)
Transcription machinery [BR:
bok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DM82_6030 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GSH-S_ATP
DUF7853
Motif
Other DBs
NCBI-ProteinID:
AIO70464
UniProt:
A0AAI8BED8
LinkDB
All DBs
Position
2:complement(2701528..2703573)
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AA seq
681 aa
AA seq
DB search
MTKKLNEVSVDDDANQSDEQQPTAASGKGEKAKARDRRAKEKALLKEAFATSTPGTAEEL
EERRTKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDA
ETLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEDGLRHMVMAISACPTTIADILAMAERVANEESRVDELVDGLIDPNAADADGFSE
KDAEEIENEDEEAEENEEEEAEDDDGAAQASANAAQLEALKRASLEKFALISEWFDKMRR
AFEKEGYKSKSYLKAQETIQNELMSIRFTARTVERLCDTLRAQVDEVRQVERQILHIVVD
KCGMPRSEFIARFPSNETDLDWAEKIAAEGHSYSAILSRNIPAIREQQQRLLDLQARVVL
PLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLM
KAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQE
TGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPAD
AALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAK
ALRKLRHPSRSDKLKSFLEGN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagctgaacgaagtatccgtcgatgacgacgcaaaccagagcgacgaacag
cagcctaccgctgcgtcgggcaagggcgaaaaggccaaggcgcgcgatcgccgcgccaag
gaaaaggcgctgctgaaggaagcgttcgcgacgagcacgcccggcacggccgaggagctc
gaagagcgtcgtacgaagctgcgcgcgctgatcaagctcggcaaggagcgcggcttcctc
acgtatgccgaaatcaacgaccatctgccggacaacttcacggaaacggaagcgctcgaa
ggcatcatcggcacgttcaacgacatgggcgtcgcggtgtacgagcaggcgcccgacgcc
gagacgctgctgttgaacgacaacgcgcccgccgcgtcgtccgacgacgaggtcgaagag
gaagcggaagtcgcgctgtcgaccgtcgattccgaattcggccgcacgaccgacccggtg
cggatgtacatgcgcgagatgggcacggtcgaactgctcacgcgtgaaggcgaaatcgag
atcgcgaagcggatcgaagacggcctgcgccacatggtgatggcgatttccgcgtgcccg
accacgatcgccgacatcctcgcgatggccgagcgcgtcgcgaacgaggagagccgcgtc
gacgagctcgtcgacggcctgatcgatccgaacgccgcggacgccgacggcttctccgag
aaggacgccgaggaaatcgagaacgaggacgaggaagccgaggaaaacgaagaagaggaa
gcggaagacgacgacggcgctgcgcaggcgtccgccaacgcggcccagctcgaagcgctg
aagcgcgcgtcgctcgagaagttcgcgttgatcagcgaatggttcgacaagatgcgtcgc
gcgttcgagaaggaaggctacaagtcgaagtcatacctgaaggcgcaggagacgatccag
aacgagctgatgtcgatccgcttcaccgcgcgtaccgtcgagcgactgtgcgacacgctg
cgtgcgcaggtcgacgaagtgcgtcaggtcgagcgtcagatcctgcacatcgtcgtcgac
aagtgcggcatgccgcgctcggagttcatcgcgcgcttcccgagcaacgaaaccgatctc
gactgggccgagaagatcgcggccgaaggccattcgtacagcgcgatcctgtcgcgcaac
attccggcgatccgcgaacagcagcagcgtctgctcgacctgcaggcacgcgtcgtgctg
ccgctcaaggatctgaaggaaaccaaccgccagatggcggcgggcgaactgaaggcgcgt
caggcgaagcgcgagatgaccgaggcgaacctgcgtctcgtgatctcgatcgcgaagaag
tacacgaaccgcggcctgcagttcctcgacctgatccaggaaggcaacatcggcctgatg
aaggcggtggacaagttcgaataccgtcgcggctacaagttctcgacgtatgcgacgtgg
tggatccgtcaggccatcacgcgttcgatcgcggaccaggcgcgcacgatccggattccg
gttcacatgatcgagacgatcaacaagatgaaccgcatctcgcggcagatcctgcaggaa
actggcctcgagccggatccggcaacgctcgccgagaagatggagatgccggaagacaag
atccgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatcggcgac
gacgacgattcgcatctcggcgacttcatcgaggacaccaacacggtcgcgccggccgat
gccgcgctgcatgcgagcatgcgcgatgtcgtgaaggacgtgctcgattcgctgacgccg
cgtgaggcgaaggtgctgcggatgcgcttcggtatcgagatgagcaccgatcacacgctc
gaggaagtcggcaagcagttcgacgtcacgcgtgagcggatccgtcagatcgaggcgaag
gcgctgcgcaagctgcgtcatccgagccgttcggacaagctgaagtcgttccttgaaggg
aactga
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integrated database retrieval system
