Burkholderia oklahomensis EO147: DM82_963
Help
Entry
DM82_963 CDS
T03284
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bok
Burkholderia oklahomensis EO147
Pathway
bok03420
Nucleotide excision repair
bok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM82_963
03430 Mismatch repair
DM82_963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bok03400
]
DM82_963
Enzymes [BR:
bok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM82_963
DNA repair and recombination proteins [BR:
bok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM82_963
MMR (mismatch excision repair)
Other MMR factors
DM82_963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AIO67236
UniProt:
A0AAI8B7Z8
LinkDB
All DBs
Position
1:1113173..1115533
Genome browser
AA seq
786 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGYASPATVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDATDSFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGGHNAI
FAVGDDDQSIYAFRGANVGNMRDFENEFRVRNLIKLEQNYRSHGNILDAANHLIANNAHR
LGKNLRTDAGHGEPVRVYEAATDAQEAAWIVEEIRSLVNTGLARSEVAVLYRSNAQSRSI
EHTLMTAGIPYRVYGGLRFFERQEVKHALAYLRLIDNPSDDTAFARVVNFPTRGIGARSI
EQLADAARLYDCSMAAAIPYVTGKAGTSLGAFANLIAKMRAETAQMSLPETVEHVVRASG
LAEFYQGEREGQDRLENLQELVNAATAFVSEEGYGLDTPARSIPLHARASAAPELAAGDA
DPADAVLAPANLADPAQNPDAMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAVESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQHVLKWLTPKVEAGARWGGRSDNAGWGRDWFARPGGARDSVVDAAVSAP
LPAFANQQREAENGFRIGQQVFHTKFGEGTVTALEGSGTDAKAQVKFKRHGEKWLALAVA
KLQAVE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaacctgaaccccgaacaactcgccgccgtcacgttgccgaac
gagccggcgctgatcctcgccggggcgggcagcggcaagacccgcgtgctcatcacgcgg
atcgcgtggctgatccagcacggctacgcgtcgcccgcgacggtgctcgccgtcacgttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtccgcgatgatgccgatcgacacg
cgcggcatgtggatcggcacgttccacggcctctgcaaccggatgctgcgcgcgcaccat
cgcgacgcgggcctgccgcagacgttccagatcctcgacacggccgaccagctctccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgagaaatatccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgtcccgacaaggtcgacgcgacc
gacagcttcaaccgcaagttcgtcgagctgtaccaggcgtacgaccagcaatgccagcgc
gagggcgtggtcgatttccccgagctgctgctgcgctgctacgagctgctcgcgcacaat
ccgccgctgcgcgcgcactatcaggcgcgcttcaagcacatcctcgtcgacgagttccag
gacacgaacaagctgcagtacgcgtggctgaagctcctcgcgggcggccacaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgagaacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacattctcgacgcggcgaatcatctgatcgcgaacaacgcgcaccgg
ctcggcaagaacctgcgcaccgacgcgggccacggcgagccggtgcgcgtctacgaggcg
gcgaccgacgcgcaggaagcggcgtggatcgtcgaggagatccgctcgctcgtgaatacg
ggcctcgcgcgcagcgaggtcgcggtgctgtaccggagcaacgcgcagtcgcgctcgatc
gagcacacgctgatgacggcgggcatcccgtaccgcgtgtacggcggcctgcgcttcttc
gagcggcaggaagtgaagcacgcgctcgcgtatctgcgcctcatcgacaatccgagcgac
gacaccgcgttcgcgcgcgtcgtcaacttcccgacgcgcgggatcggcgcgcgttcgatc
gagcagcttgccgacgccgcgcgcctgtacgactgctcgatggcggccgcgattccgtac
gtgacgggcaaggcgggcacgagcctcggcgcgttcgcgaacctgatcgcgaagatgcgc
gcggaaacggcgcagatgagcctgcccgagacggtcgagcacgtcgtgcgcgcaagcggc
ctcgcggagttctaccagggcgagcgcgaagggcaggatcgcctcgagaacttgcaggaa
ttggtgaacgcggccaccgcgttcgtctccgaggaaggttacgggctcgacacgcccgcg
cggtcgattccgctgcatgcgcgcgcgagcgcggcgcccgagctcgccgcgggcgacgcc
gatccggccgatgcggtgctcgcgcccgcgaacctcgccgatcccgcgcagaaccccgac
gcgatgacgccgctcgcgggctttttgtcgcatgcgtcgctcgaggcgggcgacaaccag
gcgcaggcgggccaggacgcggtgcagctgatgacggtccacgcggcgaaggggctcgag
ttcaccgcggtgttcatcacagggctcgaggaaggcctgttcccgcacgagaacagcgcg
gtcgaatccgacggcctcgaggaagagcgccggctgatgtacgtcgcgatcacgcgggcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacggccagacccgctac
aacatccgctcgcgcttcttcgacgagctgccgcagcacgtgctcaagtggctgacgccg
aaggtcgaggcgggcgcccgctggggcggccgctcggacaacgccggctggggccgcgac
tggttcgcgcggccgggcggcgcgcgcgacagcgtcgtcgacgcggcggtgtccgcgccg
ctgcccgcgttcgcgaaccagcagcgcgaggccgaaaacggcttccggatcggccagcag
gtgtttcacacgaagttcggcgaaggcacggtgaccgcgctcgaaggcagcggcaccgac
gcgaaggcgcaagtcaaattcaagcggcacggcgagaagtggctcgcgctcgcggtcgcg
aaactgcaggcggtcgaatga
DBGET
integrated database retrieval system
