Bos mutus (wild yak): 102266762
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Entry
102266762 CDS
T02919
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bom
Bos mutus (wild yak)
Pathway
bom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102266762 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bom03021
]
102266762 (POLR1A)
Enzymes [BR:
bom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102266762 (POLR1A)
Transcription machinery [BR:
bom03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102266762 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
102266762
NCBI-ProteinID:
XP_070235534
LinkDB
All DBs
Position
11:complement(57941928..58029110)
Genome browser
AA seq
1717 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFTNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLL
LCQLRVLEVGALQAVYELERILYRFLEENADPTACEIQEELEQYTIKILQNNLPGSQGAQ
VKNVCESRSKLISVFWKVHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRRADQKDS
EPQGIEEAQMGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPTT
EEEKDSWMAMDRSFLSQLPGQSLTDRLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSASDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARVLPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFNREQYMELVYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGGKAWVKES
PRLVPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHGIIEDSTHCGPRAVRAALNLPEAVSCD
EVQGKWQDAHLSKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLTSNYEVIMKTKHLHEVLSRADPQKALRHFRAIKKWHSKHS
NTLLRKGAFLNYSQKIQAAVKALNLEGTNQNGRSPETYQMLRMWAELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWAAQAERSYEKSGLSLDSLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIK
TPMMSVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFCIGEKQNKFRVYQLRFQ
FLPHAYYQQEKCTRPEDILHFMETRFFKILMEAIRKKNSKASAFRNVNTRRATQRDLDNA
GESERNRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYDSEEEEEKEEEEK
EEEDIQEEGTGLKEGVQQEQEEGGWAPEESSLPGAPLTQPQKRARSREPQGAEAVERRAQ
AVRECHPFIEDYQYDTHGSLWCQVTLKLPLMKVNFDMSSLVASLAQGAVIYATKGITRCL
LNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEK
EIKDVFAVYGITVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQ
ATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaaaaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagaactcaagaaattaagcgtgaagtccattacgaaccctcggtacctggac
agcctggggaacccctcggtaaatggcctgtatgatttagctctgggccccgccgactcc
aaagaggtgtgctccacctgcgtgcaggacttcaccaactgctctgggcacttgggccac
atcgacctcccactcaccgtgtacaaccctctcctcttcgataaactctaccttttgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtggttcacctctta
ctgtgccagctgagagtcctggaagttggggccctgcaagcagtgtatgagctggagaga
attctctacaggtttctggaagaaaatgctgatcctactgcctgtgaaattcaggaagag
ctagagcaatatacaatcaaaatcctgcagaacaacctcccaggatcccagggtgcacaa
gtgaaaaatgtctgtgagagcaggagcaaactcatctctgtcttctggaaggtacatatg
actgctaagagatgtccccactgcaaaactgggcggtcagtggtccggaaggagcacaat
agcaaactgaccatcacgtacccggccatggtgcacaggagagctgaccagaaggacagt
gagccccagggaattgaggaagctcagatgggaaaacgaggatacctgacaccctccagt
gctcaagaacatctcatagctctttggaaaaatgaagggttctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccaggttcaaccccagtatgttctttctggat
ttcttggtggtaccaccctcaaggtatcgccctgtcaaccgccttggggaccagatgttc
accaacgggcagacggtgaacttgcaggctgtcatgaaggacgtggttctgatccgaaag
cttctggcactgatggcccaagaacaggagctgccaagtgaggtggcagcacccaccaca
gaagaggaaaaagactcttggatggctatggaccgatcttttttgagtcagcttccaggc
cagtccctcacagacagactttacaacatttggattcgccttcagagccacgttaatatt
gtgtttgatagcgagatggacaaattaatgatggaaaagtaccccggcattagacagatc
ctggagaagaaggatggtttgttccgaaagcacatgatggggaagcgcgtagactacgca
gcccgctcggtcatctgcccggacatgtacatcaacaccaatgaaattggaattcccatg
gtgtttgccacaaagctgacctaccctcaaccagtcaccccctggaatgttcaggaactg
aggcaggcggtcatcaacggccccaacgtgcaccctggagcctctatggtcatcaacgag
gatggcagtcgcacagccctgagcgcttcggacctcacgcagcgggaggcagtggccaaa
cagctcctgacaccagctacgggggcccctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacattctcctcctgaaccggcagcccaccctgcacaggccctcc
atccaggcgcatcgcgcccgcgtcctccccgaggagaaagtcctgcggctccactatgcc
aactgcaaggcctacaacgccgactttgatggagatgagatgaacgcccactttccccag
agtgaactgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccagccattggcggggctgatccaagatcacatggtttcaggagcaaac
atgaccattcgaggctgctttttcaaccgggagcagtatatggagctggtgtaccgagga
ctcacagacaaagtgggacgtgtgaagctctttcctcctgccatcctgaagccctttcct
ttgtggacaggaaagcaggtcgtgtccacattgctcatcaacataatcccagaggaccat
atccccctgaacttgtcaggaaaggcgaagatcggtggaaaggcctgggtgaaggagtct
cctcggctcgttcccggctttaaccccgactccatgtgcgagtcccaggtgatcatcaga
gcaggggaactgctgtgcggggtgctggacaaggcgcactacggaagctccgcctacggc
ctggtccactgctgctacgagatctacggtggggagaccagcggcagggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttgggagtagaa
gacattttggtcaagccgaaggcggatgtcaggagacatgggatcattgaagactccacc
cactgtgggccccgggccgtcagggctgcgttaaacctgccagaggcagtgtcatgtgat
gaagtccaagggaagtggcaggatgcccatctgagtaaagatcagagggattttaacatg
attgacttgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaaggcatgc
atgcccttcggcctacacagacagttcccagagaacaatctgcagatgatggtacagtct
ggagccaaaggttcgacagtgaacaccatgcagatttcgtgcctgctgggccagatcgaa
ttggaaggtcggagacccccgctcatggcatctggcaagtcgttgccctgcttcgagcct
tatgaattcacccccagggctggcggcttcgtgactggcaggttcctcactggcatcaag
cctccggagttcttcttccactgcatggccggccgagagggtctggtggacactgctgtg
aagaccagccgttccggatacctccagaggtgcatcatcaaacacctggaggggctggtt
gtccaatacgacctgacagtccgtgacagtgatggcagcgtggtgcagttcctgtacggg
gaggacggcctggacatccccaagacacagttcctgcagcctaagcagttccccttcctc
accagcaactatgaggtaataatgaaaacgaagcatctccatgaagttttatccagagcg
gatccccagaaagctctccgtcatttcagagccatcaaaaaatggcacagcaagcattcc
aacaccctcctgaggaaaggcgccttcttgaattactcccagaaaattcaggcagctgtg
aaagccttgaaccttgagggcacaaaccagaacggccgcagccccgagacttaccagatg
ctgaggatgtgggctgagttagacgaacaaagccggaggaagtaccagaagaaggcggct
ccttgtcccgaccccagtctgtctgtctggcgcccagacatctacttcgcatctgtgtca
gaaacatttgaaaagaagatggacgactacagctgcgagtgggcagctcaggcagagcgg
agttacgagaaatcggggctttctctcgacagtttgaggactctgctgcagctcaagtgg
cagcgctctctatgcgacccgggtgaggccgtgggcctgctggccgcccagagcatcggg
gagccctccacacagatgacgctcaacaccttccactttgccggcagaggcgagatgaac
gtcaccctgggcattccgaggttgcgggagatcctcatggtggccagttccaacatcaag
acgccgatgatgagtgtacctgtgttcaataccaagaaagcactgaagaaagtgaaaagc
ctgaagaagcaactcaccagagtgtgtctcggggaggtgttggagaaaattgatgtccag
gagtccttctgtataggggagaaacagaacaagttccgggtataccagctgcggtttcag
ttcctgccacatgcgtactaccagcaggagaagtgcacgaggcccgaggacatcttacac
ttcatggaaaccagattctttaaaattctgatggaagccatcaggaagaagaacagcaaa
gcatcagctttcagaaatgtgaacacgcggagagccacccagcgggatctagacaatgct
ggcgagtcagagaggaatcggggagagcaggagggcgacgaggaagaggaggggcacatt
gtggacgctgaagctgaggagggagatgctgacgcctcagatgccaaacgcaaggaaaaa
caagaggaggaggtcgactatgacagcgaggaggaggaggagaaggaggaagaggagaag
gaggaagaggacattcaggaggaagggaccggcctcaaagaaggcgttcagcaggagcag
gaggaaggcggctgggcccccgaggagagctcgctccccggtgcccccctgacgcagcca
cagaagcgcgcccgaagccgggagccccagggggccgaggcggtggagcgccgggcacag
gcggtgcgcgagtgccatccgttcatagaggactaccagtatgacacacacggcagcctg
tggtgccaggtgacgctgaagctccctctcatgaaagtcaactttgacatgagctccctg
gtagcgtccttggcccaaggagccgtcatctatgcaaccaagggtatcacaaggtgcctc
ctgaatgagaccaccaacagtaagaatgagaaggagcttgtcttaaacacagaaggcatc
aacctcccggagctgttcaagtacgccgaggtcctagatctgcgccgtctctattccaat
gacatccatgccatggccagcacatacggcatcgaggccgcactgcgcgtgattgaaaag
gagatcaaggacgtgtttgccgtatacggcatcaccgttgacccccgccacctctcgctg
gtggctgactacatgtgcttcgagggtgtttacaagccactgaaccgctttgggatccgg
tcaaactcctcgccactgcagcagatgacgtttgagaccagcttccagtttctgaagcag
gccaccctcatgggatcccatgacgaactgaggtccccatcagcctgcctcgtggtcggg
aaggtcgtcaagggtgggaccggcctcttcgagctcaagcagccactaagatag
DBGET
integrated database retrieval system
