Bos mutus (wild yak): 102267614
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Entry
102267614 CDS
T02919
Symbol
HMGB1
Name
(RefSeq) high mobility group box 1
KO
K10802
high mobility group protein B1
Organism
bom
Bos mutus (wild yak)
Pathway
bom03410
Base excision repair
bom04140
Autophagy - animal
bom04217
Necroptosis
bom04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102267614 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102267614 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
102267614 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102267614 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bom03036
]
102267614 (HMGB1)
03400 DNA repair and recombination proteins [BR:
bom03400
]
102267614 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bom04147
]
102267614 (HMGB1)
Chromosome and associated proteins [BR:
bom03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
102267614 (HMGB1)
DNA repair and recombination proteins [BR:
bom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102267614 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
102267614 (HMGB1)
Exosome [BR:
bom04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102267614 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
102267614
NCBI-ProteinID:
XP_005902225
LinkDB
All DBs
Position
Un
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatattcct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacctaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctggcctg
tctattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcggatgat
aagcagccttatgagaagaaggctgctaagctgaaggaaaagtatgaaaaggatattgcc
gcataccgagctaaagggaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaa
gaagatgaagaggatgaggaggaggaagaagatgatgatgatgagtaa
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integrated database retrieval system