KEGG   Bos mutus (wild yak): 102267614
Entry
102267614         CDS       T02919                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group box 1
  KO
K10802  high mobility group protein B1
Organism
bom  Bos mutus (wild yak)
Pathway
bom03410  Base excision repair
bom04140  Autophagy - animal
bom04217  Necroptosis
bom04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102267614 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102267614 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    102267614 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    102267614 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bom03036]
    102267614 (HMGB1)
   03400 DNA repair and recombination proteins [BR:bom03400]
    102267614 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bom04147]
    102267614 (HMGB1)
Chromosome and associated proteins [BR:bom03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    102267614 (HMGB1)
DNA repair and recombination proteins [BR:bom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102267614 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     102267614 (HMGB1)
Exosome [BR:bom04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   102267614 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 102267614
NCBI-ProteinID: XP_005902225
LinkDB
Position
Un
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatattcct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacctaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggcgaacatcctggcctg
tctattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcggatgat
aagcagccttatgagaagaaggctgctaagctgaaggaaaagtatgaaaaggatattgcc
gcataccgagctaaagggaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaa
gaagatgaagaggatgaggaggaggaagaagatgatgatgatgagtaa

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