Bos mutus (wild yak): 102268431
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Entry
102268431 CDS
T02919
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X3
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bom
Bos mutus (wild yak)
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bom03021
]
102268431 (CHD1)
03036 Chromosome and associated proteins [BR:
bom03036
]
102268431 (CHD1)
Transcription machinery [BR:
bom03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102268431 (CHD1)
Chromosome and associated proteins [BR:
bom03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102268431 (CHD1)
SLIK complex
102268431 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102268431
NCBI-ProteinID:
XP_005897836
LinkDB
All DBs
Position
7:complement(29331787..29402396)
Genome browser
AA seq
1710 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSRDNKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQHQASSNSGS
EEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDY
EPKNKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEDDEEEYDNDKRSSRRQATVNVSY
KEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGD
PNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECS
WEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEAGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGPTF
RISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEA
QRLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSDKSDEDDDKLSESKSESKER
SKKSSVLDAPVHITASGEPVPIAEESEELDQKTFSICKERMRPVKAALKQLDRPERGLSE
REQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHA
IKKRQESQQNNDQNSSLNTQVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDR
HQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREKHRKLDDHRSRDHRSNLE
GSLKDRTHSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRYHSDWQMDHRASSSGPRSPLD
QRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttccggctctggatctggttcgagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagcgactcagactctggatccgaatcgggcagt
cagtcagagtctgagtcagacaattcccgagacaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttctggaaatctagccctagtattttggccgttcagagatctgca
atgcttaagaagcagcagcagcagcagcagcaacatcaagcttcatctaatagtggatca
gaggaggattcctctagcagtgaagattccgatgactcatccagtgaggtcaaaaggaaa
aagcataaagatgaagattggcagatgtctggatcgggatcgccctctcagtctggttcg
gattcagaatctgaagaagaaagagataaaagcagttgtgatgaaacagaatcagattat
gagccaaaaaataaagttaaaagtagaaaacctcaaaatagatctaagtcaaaaaatgga
aaaaagattattggacaaaaaaagagacagattgattcatctgaggaggaggatgatgaa
gaagaatatgataatgataaaagaagctctcgtcgccaagcaactgtcaatgttagctat
aaggaagatgaggaaatgaaaacagattctgatgacctcctggaagtctgtggagaggat
gttcctcaacctgaggaagaggaatttgaaacaatagaacggtttatggattgtcggatt
ggaagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgac
ccgaatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatgg
aaaggatggtcacatatccacaatacttgggagacagaggaaacccttaagcagcaaaat
gttagaggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaagatgg
ttgaaaaatgcttctccagaagatgtggaatattataattgtcagcaagaacttacagat
gatctccataagcagtatcaaatagtggagcgaataattgctcactccaatcagaagtca
gctgctggctatcctgattattattgcaaatggcagggtcttccatactcagagtgcagc
tgggaagatggagctcttatttccaaaaagtttcaagcatgcatagatgagtatttcagc
aggaatcaatcaaaaaccactccttttaaagactgcaaagtattaaaacaaaggccaaga
tttgtagccctaaagaagcagccatcctatattggaggacatgaaggattagaattaaga
gattatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggtaatagttgc
atacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactat
ttgtttcatgaacaccaattatatggaccttttctgttagtagtaccactctccactctc
acttcctggcaaagggagattcagacatgggcttctcaaatgaatgctgtggtttattta
ggtgacatcaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaa
cggttaaaatttaatatactgttaacaacttatgaaatcttgttgaaggataaggcattc
cttggaggtctgaattgggcatttataggtgtggacgaagcacatcgattaaagaatgat
gactctcttctgtataaaactttaatagattttaagtccaatcaccgtctccttatcact
ggaactcctctgcaaaactccctgaaagagctctggtctttgctacatttcattatgcca
gaaaagttttcttcctgggaagattttgaagaagaacatggcaaaggcagagaatatggt
tatgcaagcctccacaaggagcttgagccgtttctgttgcgaagggttaagaaagatgtg
gaaaaatctcttcctgccaaggttgaacagattttaagaatggaaatgagtgctttacag
aaacaatattacaagtggatattaactaggaattacaaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaatattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaactaattcttcttgacaaactgttaattcgcctaagagag
cgaggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgcagaa
tatttgaagtatcgtcagtttccctttcaaagattagatggatcaatcaaaggggagctg
aggaaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctt
tccacaagagctggaggtttaggaattaacttagcctcagctgacactgttgttatattt
gattctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattggg
caaaagaaacaggtgaatatttatcgtctggttacaaagggatcagttgaagaggatatt
cttgaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggacaca
actgggaagacagtactacacacaggttctgccccttcaagttctactcctttcaataaa
gaagaattatcagccattttaaagtttggtgctgaggaactttttaaggagcctgaagga
gaagaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcat
gaaaatgaagcaggacctttaactgtaggagatgaattactttctcagttcaaggtggcc
aacttttcaaatatggatgaggatgatattgagttggagcctgaaagaaattcaaagaac
tgggaagaaatcattcctgaagatcaaagacggcgattagaagaagaggaaagacaaaag
gaacttgaagaaatttatatgctccccagaatgagaaactgtgcaaaacagattagtttc
aatggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgattca
atatcagaaagaaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaaaat
attaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggt
ggccctctggaaagattagatgcaattgctcgagatgctgaattagttgataagtcagag
acagacctcagacgactaggagaattggtgcataatggttgcattaaagctttaaaggac
agctcttcaggaacagaacgaacaggtggtagacttggaaaagtaaagggcccaacattc
cgaatatcaggtgtacaggtgaatgccaagctggtcatctcccatgaagaagaattaata
ccgctgcacaaatccattccttcagatccagaagaaagaaagcagtatatcatcccatgc
cacacgaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgtta
attggtatctacgaatatggatatggaagctgggagatgattaaaatggatcctgacctc
agtctgacacacaagattcttccagatgatcctgataaaaaaccacaagcaaaacaatta
cagacacgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaagaagct
cagaggctttctggtgcaggaggttcaaaaaggcgaaaagcaagagctaagaagaataaa
gcaatgaagtctataaaagtgaaagaggaaataaagagtgattcttctcccttgccctca
gacaagtctgatgaagatgatgataagctgagtgaatccaagtctgaaagcaaggaaaga
tctaagaaatcttcagtgttggatgctccagttcacatcaccgcaagtggtgaaccagtg
cccatagcggaagaatctgaagagctggatcagaagacattcagcatttgtaaagagagg
atgaggcctgtcaaagcagcattgaagcagcttgataggcctgagagaggcctttcggaa
agagaacaactggaacatactagacagtgcttgataaaaatcggagaccatatcacagaa
tgtctgaaagagtatacaaatcctgaacaaatcaagcagtggagaaaaaacctgtggatt
tttgtatctaagtttactgagttcgatgcaagaaaattacataaattatataagcatgct
attaaaaaacggcaggaatcccagcagaataatgaccagaacagcagcttgaatacgcaa
gtgattagaaatccagatgtagaaagattaaaagagaatacaaatcatgatgacagcagc
agggacagttattcgtctgatagacacttatctcaatatcatgatcatcataaagaccga
catcagggagattcgtacaagaaaagtgactctaggaagagaccttattcttcttttagt
aatggtaaagatcatcgtgattgggatcactacaagcaagacagcagatattacagtgat
agagagaaacacagaaaactggatgatcacaggagtagagaccacagatcaaatctggaa
ggaagtttaaaagacagaactcattctgatcatcgttctcattcagatcatcggttacat
tcagaccatcgatcaagttctgaatatacacaccataaatcttccagggattatagatat
cactcagattggcagatggaccatagagcttccagtagtggtcccagatctccactagac
cagaggtctccttatggctccagatctccatttgaacactcaattgaacacaaaagtaca
cctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
