Bos mutus (wild yak): 102268693
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Entry
102268693 CDS
T02919
Symbol
COL9A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
bom
Bos mutus (wild yak)
Pathway
bom04151
PI3K-Akt signaling pathway
bom04510
Focal adhesion
bom04512
ECM-receptor interaction
bom04820
Cytoskeleton in muscle cells
bom04974
Protein digestion and absorption
bom05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102268693 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102268693 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102268693 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102268693 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102268693 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102268693 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bom00535
]
102268693 (COL9A1)
Proteoglycans [BR:
bom00535
]
Extracellular matrix (ECM) proteoglycans
Others
102268693 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
DUF4882
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
102268693
NCBI-ProteinID:
XP_070233200
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Position
9:complement(9390648..9480775)
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AA seq
922 aa
AA seq
DB search
MKSLWKIPVLFFVCSFLGTWASVTVKRRPRFPVNSNSNGENELCPKVRIGQDDLPGFDLI
SQFQIDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPTRHLYPNGLPEEYSFLTTFRMT
GSTLEKHWSIWQIQDSSGKEQVGVKINGQTKSVSFSYKGLDGSLQTAAFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGQIDVDGFAVLGKLVDNPQVSVPFELQWMLI
HCDPLRPRRETCNELPARITVSPXTSQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPPGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGPRGFPGRGIP
GPPGPPGGAGLPGELGRVGPIGDPGKRGQPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGGLGEVGAQGPPGAQGLRGITGVAGEK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSPGIPGLPGPKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGLPGAKGVAGEKGNTGAPGKPGQL
GNSGKPGRQGPPGEVGPRGPRGLSGSRGEVGPVGPPGPLGKLGSLGSPGLPGLPGPPGLP
GMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGVRGPEGSR
GLPGEEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVIQEHFAQMAAS
LKRPDSGASGLPGLPGPPGPPGPPGENGFPGQMGLRGLPGMKGPPGALGVRGPKGDAGER
GDRGPPGRGPKGLPGAPGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTLQAGQRAFNSKGPNQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcttatggaaaattccagttctcttctttgtatgcagtttcctggggacctgg
gcatcagtgactgtcaagcgtcgcccaaggttccctgttaattcaaattccaatggtgaa
aatgaactctgtccaaaggtcaggattggacaagatgatttaccaggatttgacttgatt
tctcagttccagatagataaagcagcatccagaagggctatccagagggtagttggatca
actgccttacaggtggcttacaagttgggaaataatgtagacttcaggattccaaccagg
catttatatcccaatgggctgcctgaagaatactcctttctaaccacttttcggatgact
ggaagcacacttgaaaagcactggagcatttggcagattcaggattcctcagggaaggag
caagttggcgtgaagattaatggccaaacaaaatctgtttcattttcatacaaggggctg
gatggaagtctccaaactgcagccttttcgaatttgccctccttgttcgattcccagtgg
cataagatcatgattggcgtggaaaggagcagtgcgactctttttgttgactgcaacagg
attgagtccttacctataaagccaagaggtcaaattgatgttgatggctttgctgtgctg
ggaaaacttgtggataatcctcaagtttctgttccgtttgaacttcaatggatgctgatc
cattgtgaccccctgcgacccaggagagaaacttgcaatgagctgccagccaggatcacg
gtgagtccctagactagtcagaggggccccccaggtgagcagggtcctccggggccgccg
ggtccccctggagtcccgggcatcgacggcatcgacggtgatcgcggtccgaagggtccc
ccgggccccccgggtccccctggagagccggggaaaccaggagctccaggcaagcctggc
acaccgggtgccgacggattaacaggtcctgatggatcccctggctctgttggaccaaga
ggacaaaaaggagaacctggtgtgccaggacctcgtggatttccaggccgtggtattcca
ggaccccctggtcctcctgggggagcaggactccctggagagcttggccgtgtgggaccg
attggcgaccctgggaaaagaggacaaccgggcccccctggccccccgggacccagtgga
acaattggctttcatgatggagatccattgtgtcccaattcctgcccaccgggtcgttca
ggatacccaggtctgccaggcatgaggggtcataaaggagctaaaggagagattggtgaa
cctggaagacaaggtcacaagggtgaagaaggggaccagggtggactgggagaagttgga
gctcaaggacctccgggagctcaaggtttgagaggcatcaccggtgtagctggcgagaaa
ggggaaaagggtgctcggggcttagatggagaacctgggcctcaagggctccctggtgca
cctggtgaccaaggacagcgaggacctccaggagaaataggtcccaagggagacagaggg
ccacaaggttctccaggaattcctggtctccctgggcccaaaggggacacgggcctgcca
ggtgtggatggccgtgacgggatacctggaatgccgggaacaaagggggaaccagggaaa
cccgggcctcctggtgaagcaggtttgcaggggttacctggtatacctggacttcctggt
gcaaaaggtgttgctggtgaaaagggtaacacaggtgctccagggaagcctggtcaattg
gggaattctggcaaaccgggccgccaggggccgcccggagaagtgggacccagaggaccc
cggggcctttctggcagcagaggtgaagtaggaccagtgggacccccagggccactgggt
aaactgggttctcttggcagccccggcctccctggcttgcctggcccccctggacttcct
gggatgaaaggtgacaggggtgtagttggtgaacctggtccaaagggtgaacagggcgcc
tctggtgaagagggtgaagctggagaaaggggtgaactcggagatataggattacctggc
ccaaagggatctgcggggaaccctggggagcctggcgtgaggggacccgaaggcagccgg
gggcttcctggagaggaaggaccccgaggcccgcccggcccgcgcggcgtgcagggggag
cagggcgccaccggcctgcccgggatccagggccccccgggcagagcaccgactgatcag
cacatcaagcaggtttgcatgagagtcatacaagagcactttgctcagatggctgcgagt
ctgaagcgtccagactccggagcctcgggcctccctggactgcctggaccccctggcccc
ccgggtccccctggagagaatggctttccgggccagatgggactccgcggcctcccgggc
atgaagggtccccctggtgctctcggtgtgaggggccctaaaggtgatgcaggagaaaga
ggggatcgtggccccccaggaagaggtcccaaaggtttgccaggagctccgggtctccca
ggtgacccgggtcccgccagctacgggaggaacggccgggacggcgagcgaggcccccct
ggggtggcgggcatccccggtgtgcccggccccccaggccccccgggtccccctggtttc
tgcgagccagcatcctgcaccctgcaggccggtcagcgggcattcaacagcaaaggtccc
aatcagtga
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