Bos mutus (wild yak): 102268875
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Entry
102268875 CDS
T02919
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
bom
Bos mutus (wild yak)
Pathway
bom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102268875 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bom03019
]
102268875 (SMG7)
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102268875 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
102268875 (SMG7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
102268875
NCBI-ProteinID:
XP_070240918
LinkDB
All DBs
Position
16:complement(21513892..21598677)
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AA seq
1216 aa
AA seq
DB search
MRNWMFLQIVIVGENVSFKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQDTTI
IESLAADGNPGLKSVLSTGRNLSNNCDPGEKPVVTFKENMKPREVSRDQGRSFPPKEVRR
DYSKGVAVTKNDGKKDNNKRKTETKKCTLEKLQETGKQSVAVQVKSQTELRKTPVSEARK
TPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPPGNQVQAGKQSHIPYSQQRPSGPGPVTQGPQQPQPPSQQPLPPLPAPP
AAQTAGQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSLQPPVRQQQPLEKTMKPFPMEPYNHNPSEVKIPEFYW
DSSYSTADNRAVMAQQASVDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQ
ERYPNNSVFNEVYGKNLTTSSKAELNPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYL
SATSSSESSWHQASTPSGSWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGAMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcc
cagatgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagccgaagtctggaca
tccaggcaggctctgcaggacctgtaccagaaaatgcttgttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtgaagtcttcccagttgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatttgc
cagcactgcctcgttcaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcggctcagcttgtcccctctaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagaccatctgactacaattttctactactgcaga
agcattgctgtgaaattccctttcccagctgcctctactaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaaaaccaaatggggtgtttctgacttcatcaag
gcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaagttggaagaacagtttaagaggctgctattccagaaagctttcaactct
cagcagttagttcacgtcactgtcattaacctgtttcaacttcatcatcttcgtgacttt
agcaacgaaacggagcagcatagttatagccaagatgagcagctgtgttggacacagttg
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaacaagtct
caggaggaatcctacaatgcctatcccctacctgccgtcaaggtgtccatggactggctg
agactcagacccagggtgtttcaggaggcagtggtggatgaaagacagtacatttggccg
tggctaatttctcttctgaacagtttccatccccatgaagaagatctttcaagtactaat
gcaacaccacttccagaggagtttgagttacaaggattcttggctttgagaccttctttc
aggaacttggatttttccaaaggtcaccagggtattacaggagacaaagagggtcagcaa
cgacaaatacgacagcagcgtttgatctctataggcaaatggattgcagataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagag
ttaatactggaagaccccagtgaagccaaagagaacctcattctgcaagacacaaccatc
atagagtccctggcagctgacgggaacccaggactgaaatcagtgctatctacaggccgg
aatctaagcaacaactgcgacccaggagagaaaccagtggtcaccttcaaagagaacatg
aagccacgagaagtgagcagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactatagcaaaggagtagctgtaactaagaatgatggaaagaaggacaacaacaagagg
aaaacagaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagagtgtg
gcagtgcaggtaaaatctcagacagagttaagaaagactccagtgtctgaagccaggaaa
acacctgtaactcaaaccccaagtcaagcaagtaactcccagttcatccccattcatcac
cctggagccttccctcctcttcccagccggccagggttcccgcccccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccaccaggaaaccaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctccggaccagggccagtgacccag
ggacctcagcagcctcagccaccttcccagcagcccctcccacctctgccagctccgcca
gcagcacagactgcaggccagctgcaggttcaagctctagctcagcagcaacagtcccct
acaaaagctgtgccggctttggggaaaagtcctcctcaccactctggattccagcagtat
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattaggg
aaaatcatgcctgtgaaacagccctactaccttcaaacccaagaccccataaaactgttt
gagccgtcgttgcaacctcctgtaaggcagcagcagcctctcgagaaaacaatgaagcct
ttccccatggagccatataaccataacccctcagaagtcaagatcccggagttctactgg
gattcttcctacagcactgctgataacagagctgtgatggcacagcaagccagtgtggac
cgcaggggcaaacggtccccgggagtcttccgtccagagcaggaccctgtgcccaggatg
ccatttgaggaccccaaaggctcccctctgcttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctg
ctggggcctctcgcctctcttcctggacgaagcctctttaaatccttactggagaagccc
tcagagctcatgtcacattcatcctctttcctgtccctcaccggattctccctcaatcag
gaacgatacccaaataacagtgtgttcaatgaggtatacgggaagaacctgacaaccagc
tccaaagcagaacttaatccctcaatggctccccaggaaacatcactgtattcgcttttt
gaagggactccatggtctccatctcttcctgccagttcagatcattcaacaccagccagc
caatctcctcattcctccaacccaagcagcctgccaagctcccctccaacacacaaccac
aattctgtcccattctccaattttggacccattgggactccagataacagggataggaga
actgcagaccggtggaaaactgataagccagccatgggtgggtttggcatcgattatctc
tcagcaacatcatcctctgagagcagttggcatcaggccagcactccaagtggctcctgg
acaggccatggcccatccatggaggattcctctgctgtcctcatggaaagcctaaagtct
atctggtccagttccatgatgcatcctggaccttccgctttggagcagctgttaatgcag
cagaagcagaaacagcagcggggccaaggcgccatgaaccctccacactga
DBGET
integrated database retrieval system
