Bos mutus (wild yak): 102269043
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Entry
102269043 CDS
T02919
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
bom
Bos mutus (wild yak)
Pathway
bom04622
RIG-I-like receptor signaling pathway
bom05161
Hepatitis B
bom05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102269043 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102269043 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
102269043 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bom03019
]
102269043 (DDX3X)
03041 Spliceosome [BR:
bom03041
]
102269043 (DDX3X)
03036 Chromosome and associated proteins [BR:
bom03036
]
102269043 (DDX3X)
Enzymes [BR:
bom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102269043 (DDX3X)
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102269043 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
102269043 (DDX3X)
Spliceosome [BR:
bom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102269043 (DDX3X)
Chromosome and associated proteins [BR:
bom03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102269043 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102269043
NCBI-ProteinID:
XP_005889496
LinkDB
All DBs
Position
X:complement(90528814..90543874)
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AA seq
661 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRGDYDGIGGRGDRGGFGKYE
RGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIES
FSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQ
IYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY
GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI
RRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVW
VEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDRE
EALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLA
TSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARD
YRQSSGGSSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGSFYNSDGYGGNYNSQGVDWWG
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcatcagataatcagagtggaggaagtacagccagcaaagggcgctatattcct
cctcacttaaggaacagagaagctactaaaggattctatgataaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggttcccgtagtgattcaagagga
aagtctagtttcttcagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cgaggtgactatgatggcattggcggccgtggtgacagaggtggttttggcaaatacgaa
cgtggaaatagccgctggtgtgacaaatcagatgaagatgattggtcaaaaccactccca
ccaagtgaacgcttggaacaagaactcttttctggaggcaacactgggattaactttgaa
aaatatgatgacattccagttgaggcaacaggcaacaactgtcctccacacattgaaagt
ttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgttacact
cgcccaactccagtgcaaaagcatgctattcctattatcaaagagaagagagacttgatg
gcctgtgcccaaacagggtctggaaaaactgcagcatttctcttgcccatcttgagtcag
atttattctgatggtcccggtgaggctctgagggccatgaaggaaaatggaagatatggg
cgccgcaaacaatacccaatctctttggtgttagcaccaactagagaattggccgtacag
atctatgaggaagccaggaaattttcataccgatctagagttcgtccttgtgtggtttat
ggtggtgctgatattggtcagcaaattcgagacttagaacgtggatgccatttattagtt
gcgactccaggacgtctagtggatatgatggaaagaggaaaaattggattagacttctgc
aagtacttggtgttagatgaagctgatcggatgttggatatggggtttgaacctcagata
cgtagaatcgttgaacaagatactatgccaccaaagggagttcgccacactatgatgttt
agtgctactttccctaaggaaatacagatgcttgctcgtgacttcttggatgaatatatc
tttttggccgtaggaagagttggctctacctctgagaacataacacagaaagtagtttgg
gttgaagagtcagacaaacggtcatttctgcttgatcttctaaatgcaacaggcaaagat
tcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctggaggatttctta
taccatgaaggatatgcttgtaccagtatccatggagaccgatctcagagagatagagaa
gaggcccttcaccagttccgctcaggaaaaagcccaattctcgtggctacagcagtagca
gcaagaggactggacatatcaaatgtgaaacatgttatcaattttgacttgccaagtgat
attgaagaatatgtacatcgcattggccgtacaggacgtgtaggaaaccttggccttgcc
acctcgttctttaatgagaggaacataaatattaccaaggatttgttggatcttcttgtt
gaagctaaacaggaagtgccatcttggttagaaaacatggcttatgaacaccactacaag
ggtagcagtcgtggacgatccaaaagtagtagattcagtggaggatttggtgccagagac
tatcgacagagtagtggtggcagcagttccagcttcagcagcagccgcgccagcagcagc
cgcagtggtggaggtggccatggaagcagcagagggtttggtggaggtggctatggaagc
ttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtggggt
aactga
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