Bos mutus (wild yak): 102269162
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Entry
102269162 CDS
T02919
Symbol
MSH6
Name
(RefSeq) mutS homolog 6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bom
Bos mutus (wild yak)
Pathway
bom01524
Platinum drug resistance
bom03430
Mismatch repair
bom05200
Pathways in cancer
bom05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102269162 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102269162 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
102269162 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
102269162 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bom03400
]
102269162 (MSH6)
DNA repair and recombination proteins [BR:
bom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102269162 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
102269162
NCBI-ProteinID:
XP_005895689
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All DBs
Position
Un
AA seq
1362 aa
AA seq
DB search
MSRQSTLFSFFPKSPAVNNANKAPVRASSGSSAAAAATGASPSPGGDAAWNEAGPEPLAG
TTSRAEARNLNGGLRKSAYPAVPARDSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTF
IREKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSHSKEAQKGGHFYSAKPEILRAMQRA
DEALNKDKIKRLELAVCDEPSEPEEEEETEVGATYTSDKSEEENDIESEEEVRPKVQGSR
RSSRQIKKRRVISDSESDVGGSDVEFKPDTKEEASSDEISSGVGDSDSEGLDTPVKVAPK
RKRMVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSVPQNSEPQAHISGGCDDS
NRPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQ
NFDLVIFYKVGKFYEMYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYK
VARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYL
LSLKEKEEESSGHTRVYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKG
NLSMDTKMILKSSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDGGVMLPQVL
KGMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHA
TRPGAVFAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLC
APLCNPHAINDRLDAIEDLMVVPDKISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPD
SRAIMYEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVLTLQTKSPE
GRFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQR
SRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLGNLI
NAEERRDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRGGDGPMCRPII
LLPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGPNMG
GKSTLMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETA
SILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQ
NVAVRLGHMACMVENECEDPSQETITFLYKFINGACPKSYGFNAARLANLPEEVIQKGHR
KAREFEKMTQSLRLFREVCLASERSTVDADAVHKLLTLIEEL
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtttagcttcttccctaagtctccagccgtgaataatgcc
aacaaagcccccgtcagagcctcaagtggaagcagcgccgccgccgctgccaccggggcc
tccccttccccaggcggggatgcggcctggaacgaggccgggcctgagcccctagcgggt
accacgtcgcgggccgaggccaggaacctcaacggagggctgcggaagtcggcataccct
gcggtccccgcccgggacagttcttgtgacttctcaccaggtgatttggtttgggccaag
atggagggttacccttggtggccttgcctggtttacaaccacccttttgatggaacattc
atccgtgagaaaggaaagtctgcccgagttcatgtacagttttttgatgacagcccaaca
cggggctgggttagcagaaggctattaaagccatatacaggttcacattcaaaggaagcc
cagaaaggaggtcatttttatagtgcaaagcctgaaatactcagagcaatgcaacgtgca
gatgaagccttgaataaagacaagattaagaggcttgagttggcagtatgtgatgagccc
tcagagccagaggaggaggaagagacggaggtaggtgccacttacacatcagataagagt
gaagaggaaaatgacattgagagtgaagaggaagtgaggccaaaggtgcaaggatccaga
cgaagtagccgacaaataaaaaaacgaagggtcatatcagactctgagagtgacgttggt
ggctctgatgtggaattcaagccagacactaaggaggaagcaagcagtgatgaaataagc
agtggcgtgggggacagtgatagtgaaggcctggacacccccgtcaaagttgctccaaag
cggaagagaatggtaactgggaatggttccctcaagaggaagagttcaaggaaggaaatg
ccttcagccaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgct
ttctctgtccctcaaaattctgaaccccaagcccacattagtgggggatgtgatgacagt
aatcgccccactgtctggtatcatgaaactttagagtggcttaaggaggaaaagagaaga
gatgtgcacaggaggcggcctgatcaccctgattttgatgcatccacactctatgtgccc
gaggatttccttaattcctgtactcctgggatgaggaagtggtggcaaattaagtctcag
aactttgatctggtcatattttataaagtggggaagttttatgagatgtaccacatggat
gctcttattggggtcagtgaactagggctggtattcatgaaaggcaactgggcccattct
ggtttccctgaaattgcatttggccgatactcagattccctggtccagaagggttataaa
gtagcacgagtagaacagactgagaccccagaaatgatggaggcacgatgccgaaaaatg
gcacacatatctaagtatgacagagtggtacggagggagatctgtaggatcattacgaag
ggtacacagacctacagtgtgctggaaggtgacccctcggagaactacagtaaatacctt
cttagcctcaaagagaaagaagaggagtcttctggccacactcgcgtgtatggagtatgc
tttgttgatacctctctagggaggttcttcataggtcagttttcagatgatcgccattgt
tccaggtttaggactttagtggcacactatcctccagtacaagtcttatttgagaaggga
aatctctcaatggatactaagatgattctcaagagttcattatcctcttctcttcaggaa
ggtctgataccgggctcccagttttgggatgcagccaaaactttgagaactctccttgaa
gaaggatattttacagacaagttaaatgaggacggtggggtgatgctaccccaggtgctt
aaaggtatgacctcggagtcagattctattggattgacaccaggagagaagagtgaattg
gccctctctgctcttggtggttgtgtcttctacctcaaaaaatgccttattgatcaggag
cttttatcaatggctaattttgaagaatatgttcccttggattctgacatggtccatgct
acaagacctggtgctgtctttgctaaagccaatcaacgaatggtgctagatgctgtgaca
ttaaacaacttggagatttttctgaatggaacaaacggttctactgaagggaccttgtta
gagaagattgacacctgccatactccctttggtaaacggctcttaaagcagtggctttgt
gccccactctgtaaccctcatgcgatcaatgatcgcctggatgccatagaagacctaatg
gttgtgcctgacaaaatctctgaggttgtagaccttcttaagaagcttccagaccttgag
agactcctgagtaaaattcataatgttgggtctcccctcaagagccagaaccacccagat
agcagggctataatgtatgaagaaaccacatacagcaaaaaaaagattattgattttctt
tctgctctggaaggattcaaagtaatatgtaaaattatagggattatggaagaagtcatt
gatgactttaagtctaaaatcctcaagcaggtccttactctgcagacaaaaagtcctgaa
gggcgctttcctgatttgacttcagaactgaaccgatgggatacagcctttgaccatgaa
aaggctcgaaagactggactgattactcccaaagcaggatttgactctgattatgaccaa
gctcttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgc
agtcgaattggctgtagaaccatagtttactggggaattggtaggaatcgttaccagttg
gaaattccagagaatttcatcacccgtaatttgccagaagaatatgagttgaaatccacc
aaaaagggttgtaaacgatactggaccaaaacaattgagaagaagttgggtaatctgata
aatgccgaagaacggagagacgcatcattaaaggactgcatgaggcgactgttctataac
tttgataaaaattacaaggactggcaggctgctgtggagtgcatcgcagtgttggatgtg
ttattgtgcctgaccaactacagtcgagggggtgatggtcctatgtgtcgtccaataatt
ctgttgccagaagaagatactcctccctttctagaccttaaaggatcacgccatccctgc
attacgaagactttttttggtgatgactttattcctaatgacattctaataggctgtgag
gaagaggaggaggaaaatggcaaagcttattgtgtgcttgttactggaccaaatatggga
ggcaagtctacacttatgagacaggctggcctattagctataatggcccagatgggctgt
tacgtaccagctgaagtgtgtaggctcacaccaattgatagagtgtttactagacttggt
gcctcagacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgcc
agtatacttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggt
accgcaacattcgatgggacagcaatagcaaacgcagttgtgaaagaacttgctgagaac
ataaagtgtcgtacgttgttttccacccactaccattcattagttgaagattattctcaa
aatgttgcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatccc
agccaggagactattaccttcctctataaattcattaatggagcctgtccgaaaagctat
ggttttaatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacataga
aaagcaagagaatttgagaagatgactcagtcactgcggttatttcgggaggtttgtttg
gctagtgaaaggtctactgtggatgctgatgctgtccataagttgctgactttgattgag
gaattatag
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integrated database retrieval system