Bos mutus (wild yak): 102270004
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Entry
102270004 CDS
T02919
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
bom
Bos mutus (wild yak)
Pathway
bom05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102270004 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bom03036
]
102270004 (DICER1)
Chromosome and associated proteins [BR:
bom03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102270004 (DICER1)
microRNA pathway
RISC loading complex
102270004 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102270004
NCBI-ProteinID:
XP_070213998
LinkDB
All DBs
Position
21:complement(58915983..58992084)
Genome browser
AA seq
1922 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEAD
TEPVVDDDDVFPPYVLRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDG
TFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVK
YEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPRPGQPCYLYVIGMVLTTPL
PDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQ
MLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIE
KSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFP
SPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRK
AKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVG
VRSLPVDFRYPNLDFGWKKSIDSKSFISIANSSSAENENYCKHSTIVVPENAAHQGANRT
SPLENHDQMSVNCRTLFSESPGKLQIEVSTDLTAINGLSYNKSLANGSYDLANRDFCQGN
HLNYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANTSTSDGSPVTAA
VPGTAETGEAPPDRTASEQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNTEKWEKDEMTKDCMLANGKLDDDFEEEEEEEEDLMWRAHKEDADDED
DFLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSATDSAYEWKMPKKSSLGSLPFSSDFED
FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIA
DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGS
RAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEKKINYRFKNK
AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV
NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE
DIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM
EPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVP
NS
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataatacc
atagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagag
ctgtcttatcagatcaggggagacttcaacagaaatggcaaaaggacggtgttcttggtc
aactctgcaaaccaggttgcccaacaagtgtcagctgtcagaactcactcagatctcaag
gtcggggaatactcaaacctagaagtaagtgcatcttggacaaaagagaaatggaaccaa
gagtttactaaacatcaggttctcgttatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
atcctagaccacccctaccgagaaattatgaagctttgtgaaaattgtccatcatgtcct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgacttg
gtggtcttagacagatatacttctcagccatgtgagattgtggtagactgtggaccattt
actgacagaagtgggctttatgaaagactgctgatggagttagaagaagcacttaatttt
atcaatgactgtaacatatctgtacattcaaaagaaagagattctactttaatttctaaa
cagatactctcagactgccgtgcggtcctggttgtcctgggaccctggtgtgccgataaa
gtagctggaatgatggtcagagagctgcagaaacacatcaaacatgagcaagaggagctg
caccggaagtttctgttgttcacagacactttcctacggaaaatccacgccctgtgtgaa
gagcacttctcccctgcctcgcttgacctgaagtttgtcactcctaaagtaataaagctg
ctcgagatcttacgcaaatacaaaccgtatgagcggcagcagtttgaaagcgtggagtgg
tataataataggaaccaggataattacgtgtcctggagcgattctgaggatgacgaggaa
gatgaagagattgaagagaaagaaaagccagagacaaattttccttctccgtttaccaac
attttgtgtggaattatttttgtggaaagaagatacacagccgtggtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataact
ggacatggcatcggaaagaatcagcctcggaacaaacagatggaagcggaattcagaaaa
caggaagaggtacttaggaaatttcgagcacatgaaaccaacctgcttattgcaacaagt
attgtggaggagggtgttgacataccgaaatgcaacttggtggttcgtttcgatctgccc
acagagtatcgatcctatgttcagtcgaagggaagagcgagggcacccatctctaattat
gtaatgttagcagacacagataaaataaagagttttgaagaagaccttaaaacatacaaa
gctattgaaaagatcttgcgaaacaaatgttccaagtcggttgataccggggaggccgac
acggagcctgtggtggatgacgacgatgttttcccaccgtatgtgctgaggcctgaggat
ggtccccgcgtcacgatcaacacagccattgggcacgtcaacagatactgtgctagatta
ccaagtgatccgtttactcatctggctcctaaatgtagaacccgagagttgcctgatggt
acattttattcaactctttatctgccaattaactcacctcttcgagcctccattgttggt
cccccaatgagctgcattcggttggctgaaagagtcgtggctctcatttgctgtgaaaaa
ctgcacaaaattggcgaactggatgaccatttgatgccagttgggaaggagactgttaaa
tatgaggaagagctggatttacacgatgaagaagagaccagtgttccaggaagaccaggt
tccacaaaacgaagacagtgctacccaaaagcaattccagaatgtttgagggagagctac
cccaggcccggtcagccctgttacctgtacgtgatcggaatggtcctgacgacaccttta
cctgatgagctcaacttcagaaggcggaagctctacccccctgaggacaccacaagatgc
tttggaatactgacagccaagcccatacctcagatcccacactttcctgtgtacacgcgc
tctggagaggtgaccatatctattgagttgaagaagtccggcttcacgttatctctgcaa
atgcttgagttgatcacaaggcttcaccagtatatattctcacatattcttcggcttgaa
aaacctgcactagaatttaaacccacagacgcggactcagcctactgcgttctacctctt
aatgttgttaatgactccagcactttggacattgactttaaattcatggaagatatcgag
aaatctgaagctcgcataggcattcccagcacaaagtattcaaaagaaactccctttgtt
ttcaaattagaagattaccaagatgcagttatcattccaagataccgcaattttgatcag
cctcatcgattttatgtcgctgacgtgtacactgatcttacccccctgagtaaatttcct
tcccctgagtatgaaacgtttgcggagtattataaaacaaagtataaccttgacctgacc
aatctcaaccagccgctgctggacgtggaccacacgtcttcacgactcaatcttttgaca
cctcgtcatttgaatcagaaggggaaagctctccctctgagcagtgctgagaagaggaaa
gccaagtgggagagcctgcagaataagcagatactggttccagaactctgtgctatacat
ccaattccagcatcactgtggagaaaagccgtttgtctcccgagcatactttaccgcctt
cactgccttctgactgcagaggagctcagagcccagacggccagcgacgctggtgtggga
gtcaggtcacttcctgtggattttagataccctaacttagacttcgggtggaaaaaatct
atcgacagcaaatctttcatctcaattgctaactcctcttcagctgaaaatgagaattac
tgtaagcacagcacaattgtcgtccctgaaaatgctgcacatcaaggtgctaatagaacc
tcccctctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgttcagcgagtca
cctggtaagctccaaattgaagtttcaacagatctgacagcaattaatggtctttcttac
aataaaagtcttgccaatggcagttacgatttagctaacagagacttttgccaaggaaac
catctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccattcag
aatttatacaattacgagaaccagcccaagcccagcgatgaatgtactctactgagtaat
aaataccttgatggaaatgctaacacatctacctcagatggaagtcccgtgacggctgcc
gtgcccggtactgcagagactggggaggcgcccccggacaggacggcttctgagcagagc
ccttctcctgggtactcctcgaggacgcttggccccaaccctgggctcattcttcaggct
ttgaccctttcgaacgctagtgatggatttaacctggagcggctcgagatgcttggcgac
tccttcctcaagcatgcgatcaccacgtatctcttctgcacttaccctgatgcgcatgag
ggccgcctttcctacatgagaagcaaaaaggtcagcaactgtaatctgtatcggcttgga
aaaaagaaggggctgcccagccgcatggtggtgtccatatttgacccccctgtgaattgg
cttcctcctggttacgtagtaaatcaagacaaaagtaacacagagaaatgggaaaaagat
gaaatgacaaaagactgcatgttggctaatggcaaactggacgatgacttcgaggaggag
gaagaggaggaggaggacctgatgtggagggctcacaaggaggatgcggacgacgaggac
gacttcctggaatacgatcaggagcacatcaagttcatagataacatgctgatggggtca
ggggctttcgtcaagaaaatctctctttctcctttttctgccaccgattctgcatacgag
tggaaaatgcccaaaaagtcctcccttggtagtctgccattctcatccgattttgaggat
ttcgactacagctcctgggatgcgatgtgctatctggatccgagcaaagccgttgaagag
gatgactttgtggtggggttctggaatccatcagaagaaaactgtggtgtggacacaggg
aagcagtccatctcttacgacctgcacaccgagcagtgcattgccgacaaaagcatagcc
gactgtgtggaagccctgctgggctgctatttaaccagctgtggcgagagggctgctcag
cttttcctctgttcgctggggctgaaggtgctcccggtaattaaaaggactgatcgggaa
aaggccatgtgcccgaccagggagaatttcaccagccaacaaaagaacctttcagggagc
cgtgcggccgcctctggagccggctaccgagcctctgtgttgaaagacttggagtatggg
tgtttgaagatccccccgaggtgtatgtttgatcaccctgacgcagacaggacactgcgt
cacctgatctcgggttttgaaaatttcgaaaagaaaatcaactacagattcaagaataag
gcttaccttctacaggcttttacacacgcctcctaccactacaatacgatcacggattgt
taccagcgcttagaattcctgggagatgcaattttggactacctcataactaagcacctt
tatgaagacccacggcagcactccccaggggtcctgactgacctgcgctctgctctggtc
aacaataccatcttcgcgtcgttggctgtgaagtatgactaccacaagtactttaaggcc
gtttctcccgagctcttccacgtcatcgacgatttcgtgcagtttcagctcgagaagaac
gaaatgcaaggaatggattctgagcttaggagatccgaggaggatgaagagaaggaagag
gatattgaagttccaaaggccatgggggatattttcgagtcactcgcgggcgccatttac
atggacagcgggatgtcgctggagacggtctggcaggtgtactatcccatgatgcggccg
ctgatcgaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatg
gaaccagaaactgccaaattcagcccagctgagagaacctacgatggcaaggtcagagtc
accgtggaagtggtcgggaaggggaagttcaaaggcgttggccgaagttacaggattgcc
aagtctgcagcagcaagaagagccctgcgaagcctcaaagctaatcaacctcaggttccc
aatagctga
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integrated database retrieval system
