Bos mutus (wild yak): 102270274
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Entry
102270274 CDS
T02919
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
bom
Bos mutus (wild yak)
Pathway
bom04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102270274 (COL20A1)
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
VWA_3
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
102270274
NCBI-ProteinID:
XP_070237523
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Position
13:complement(38748343..38771513)
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AA seq
1340 aa
AA seq
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MSVRVRPHLGVGLCLYLSVTLGLSQGQVSGRLRLAVLPEDRLQMKWRESEGSSLGYLVQV
KPRAGDPEQEVMLTTKTPKATVGGLSPSKGYTLQIFELTGSGNILLARREFVIEDLKSNS
VSRSSQRPLGATLEPTPSLVGSPDLEPPGALAPSQDPPTLGGAKSGDGVPGEEQHPPRGP
TGEGPAQPTPDLEGPNHARTSAGGRGKPGRPQFRCTPPMPVDMIFLVDGSWSIGHSHFQQ
VKDFLASVIEPFEIGPGKVQVGLTQYSGAPQTEWDLNAFGTKEEVLNAVHNLHYRGGNTF
TGLALTHVLEQNLKPRAGLRPEAAKLVILVTDGKSQDDAHAAGHVLKDLGVDIFAVGVKN
ADETELRLLASQPLDITVHNVQDFPQLGTLSGLLSRLICQKVQGRSPRGSPATPALDPPP
APTRLVLTQVTSSSVLLSWSPAPQPPLKYLIVWRPSKGGTPREVVVEGPTSSAQLHNLTS
STEYLVSVFPLYKAGVGEGLQGLATTAPLPPPQALTLAAVTPKTVRLTWQPSAEATQYLV
RWSPASPKGEEERREVRVGRPEVLLDGLAPGRDYDVWVQSLRGAEISEAQGIRARTPALT
TPRHLSFSDVSHDSARVSWEGTARPVRLFRVSYISGKGGHSGQTEVPGNATSAILGPLSS
STTYMVRVTCLYPGGSSSTLTGRLTTRKVPSPSQLSVTELPGDEVRLEWAAAAVSGVLVY
QITWTPLGEGKAREISVPGNLGTAILPGLGRHSEYEITILAYYRDGARSDPVSLRYTPVS
RSPPSNLALASESPDSLRVSWTPPSSHVLHYRLSYALASGSGPEKSISIPGPGSHVTIPD
LLAATKYRVLVSAIYGAGESVAVSATGRTAACPALHLDGSLPGFDLMAAFGLVEKEYASI
RGVAMEPSAFGPTRTFTLFKDSQLTRRASDIHLATLPPEHTVVFLLRLLPETPREAFALW
QVASEDFQPILGVLLDAGRKSLTYFNRDPRATLQEVTFDLPEVRRIFFGSFHKVHVAVGR
ARVRLYVDCRKVAERPIGEAGGLPAAGFVMLGRLAKARGPRSSSASFQLQVLQIVCNDSW
AEEDRCCELPASKEGESCPAFPSACACSSQTPGPPGPQGPPGLPGRNGAPGEQGFPGPRG
EPGPPGQMGPEGPGGQQGSPGTQGRTIQGPVGPPGVKGEKGDHGHPGLQGHPGLQGTPGK
IGIQGPKGMRGLEGTAGLPGPPGPRGFQGTAGARGSNGERGPPGAVGPTGLPGPKGERGE
KGEPQSLATIYQLVGQACESAIQTHVLKLHACTHESTRPPMPILEAPRALGTRNKARLPG
EGGHGGPHPGDRGRSPCCLK
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtccgcgtgcgccctcacctcggagtcggcctctgtctgtatctgagtgtcacc
ctggggctcagccagggacaagtgagtggccgcctgaggctggcggtgctgcctgaggac
cggctgcagatgaagtggagagagtcagaagggagcagcctcggctacctggtgcaggtg
aagcccagggcaggggacccagagcaggaggtgatgctgaccaccaagacccccaaggcc
actgtggggggcctgagcccctccaaggggtacaccttgcagatcttcgagctcactggc
tcagggaacatcctgctggctcgcagggagtttgtgatcgaggatctgaagagtaactcc
gtgagcaggagcagccagaggccactgggggcaaccctggagcccaccccttcccttgtg
gggagcccagaccttgagcccccaggggccctggccccaagccaagatccacccacactt
ggtggagccaagtcgggggacggagtacctggtgaggagcagcacccacccaggggcccc
acaggggagggccctgctcagcccaccccagacctggaggggccgaaccacgccaggacc
tcagctggagggagagggaagccaggcagaccccagttccgctgcacaccccccatgcct
gtggacatgatcttcctggtggatgggtcctggagtataggccacagtcacttccagcag
gtcaaagacttcctggccagtgtcatcgagccctttgaaattgggccgggcaaagtccaa
gtaggtctgactcagtacagtggagccccccagaccgagtgggacctgaatgcctttggc
accaaggaggaggtgttgaatgctgtgcacaacctccactacagaggaggaaacacattc
acaggcctggccctgacccacgtgctggagcagaacctgaagcccagagcaggtctccgt
ccagaggcggccaagctggtgattctggtgacagatggcaagtcccaggatgatgcccac
gctgctggccacgtgctcaaggatctgggtgtcgacatctttgctgtgggcgtgaagaat
gccgacgaaaccgagttgaggctcctggcatcccagccgctggacatcaccgtccacaat
gtgcaggacttcccccagctcggcacactctccggcctactcagccggctcatctgccag
aaggtccagggcaggagcccgcgtgggagcccagctacaccggccctggatccccctccc
gctcccacaaggctggtcctgacccaagtgacctcctccagcgtcctcttgtcctggagc
ccggccccacagccgcccctcaagtacctgattgtgtggaggccttccaagggcggcacc
cccagggaggtggtggtggaagggcccacctcgtcagcacagctgcacaacctgacctcc
agcaccgagtacctggtctctgtgttccccctctacaaggctggcgtcggcgagggcctg
cagggcctggcgaccacagcacccctgcccccaccccaggcgctgaccctggctgcagtg
acacccaaaactgtccgcctcacctggcagccctcggcagaggccacccagtacctggtg
cggtggtcacctgcctcccccaagggcgaggaggagaggagagaggtgcgggtggggcgg
ccggaggtgctgctggatggcctggccccgggcagggactatgacgtgtgggtgcagagc
cttcgaggggcagagatcagtgaggcccagggcatccgtgccaggacccccgccctgacc
acccccagacacctgagcttctcagacgtgagtcatgattcagcccgcgtgtcctgggag
ggcaccgcaagacctgtgcgcctgttcagggtcagctacatctcgggcaagggaggccac
tcgggacagacggaggttcctgggaacgccacctcagccatcctggggcccctctcctcc
tctaccacctacatggtccgcgtcacctgtctctaccctgggggcagctcctctaccctg
accggccgcctgaccacacggaaagtccccagcccgagccagctgtcggtgacagaactg
cctggggacgaagtccggctcgagtgggcggccgcggcggtgtccggcgtgcttgtctac
cagatcacgtggacgcccctgggagaggggaaggcccgtgagatttctgtcccggggaac
ctgggcacggccatcctgcctggcctggggaggcactcagagtatgagatcaccatcctg
gcctactaccgggacggggcccgcagtgaccctgtgtccctccgttacacccccgtcagc
cggagcccaccctccaacctggccttggcctcagagtcgcctgacagcctgcgggtcagc
tggacgcccccgagcagtcacgtgctccactaccggctctcctacgcgctggcctcaggc
tctggacccgagaagtcgatctccattccaggacccgggagccacgtgacaatccctgac
ctgctggcggctaccaagtaccgggtcctggtctcagccatctatggagcaggggagagc
gtggcggtgtctgccacaggccggacggcagcctgcccggccctccacctggatggctcc
ctcccaggctttgacctgatggcggccttcgggctggtggagaaggaatatgcctccatc
cgcggcgtggccatggagccctcggcctttggccccaccaggacgttcacactcttcaag
gactctcagctgacccggcgggccagcgacatccacctggccaccttgcccccggagcac
acagtcgtcttcctcctgcgcctgctccctgagacgccccgagaggcctttgcattgtgg
caggtggcaagcgaggacttccagcccatcctcggggttctgctggacgccggcaggaag
tcgctgacctacttcaaccgtgaccccagggccaccttgcaggaggtcacctttgacctg
cctgaagtgaggaggatattctttgggagtttccacaaggtgcatgtggccgtgggccgc
gccagggtcaggctctacgtggactgccggaaggtggccgagaggcccatcggggaggcc
ggcggcctgcctgctgccggcttcgtcatgctgggcaggttggccaaagcccggggcccc
cggagcagctccgcctcgttccagctccaggtgctacagatcgtgtgcaatgactcgtgg
gcagaggaggacaggtgctgcgagctcccagcatcgaaggagggagagtcctgtcctgcc
ttcccatctgcctgtgcatgttcctcacagacccctgggcccccaggcccccaaggacct
ccgggcctccccgggcggaacggagccccaggagagcaaggcttcccagggcccagggga
gagcccgggccacctggacagatgggacccgagggtcctgggggtcagcaggggtcaccg
ggcacccagggccgcaccatccagggacccgtgggtccgccaggggtcaaaggagagaag
ggggaccatggacaccccggcttgcagggccaccccggcctccagggcacccccgggaag
attggcatccagggaccgaagggaatgagaggcctggaggggactgctggactgcctggc
cccccaggccctaggggcttccaaggtactgcgggggctaggggcagcaacggcgagcga
ggacccccaggggccgtggggcccacaggactgccagggcccaagggggagcgaggagag
aagggagagccacagtccctggccaccatctaccagctcgtgggccaggcttgcgagtcc
gccatccagacgcacgtgttgaagctccatgcctgcacccacgagagcacccggcccccc
atgcccatcttggaagcccccagggcccttggcacaaggaacaaggcccggctccctgga
gaaggggggcatggtggcccccaccctggggacagaggacggtccccctgctgcctcaag
tga
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