Bos mutus (wild yak): 102270938
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Entry
102270938 CDS
T02919
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
bom
Bos mutus (wild yak)
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bom03019
]
102270938
Enzymes [BR:
bom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102270938
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102270938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
Helicase_C
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
102270938
NCBI-ProteinID:
XP_070231054
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All DBs
Position
8:110683884..110819003
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AA seq
979 aa
AA seq
DB search
MNSVDNCFFLTDYTKKKLAYRAVFFRKMTKLILSEIAKARYSSLLNDFVESNXFVINGDS
LLVACLHEKSFKFGQDLSFFYLIECYLINLISXGGQFAIVLFKDAEHAHFNFRELRALRT
ALILHLQHNTNIYVQTTFSGCLSQEWITFLEGSCPYFLINEKNIENAYLSIAVQMVKRIC
SVMEKYPELRQEADRQLIARCLRCSGFKELASSLHPVRHKREEKGQILTVGLGPARFXLQ
FMGHHLVHEERKDPDPRVQDFVPDNWQQELLDIMDKNKSAVISAPKSSGKTXASYYCMER
VLHEGNEGVVVYAAPTKALLNXAAATVENRFNKNLPNRESLCGVFTWDYCHDAPNSQCSC
LRVLITVPACFEILLLAPYHQLWVKRIRYIRFDEVHSLGGEIGAEIWEHLLIIRCPFLAL
STTISNSEWLQSVKWYWKQADGMIEKSIASTRNASCRANSHKNYLLMKQSYKVRLVLYEK
TCNDLEKYICSVSNREISFDYFHXCAALTTDHVSDTSAVWIEKFGFPSDLTLSPREMVQL
YDPTMFEFWKSCLRAQELCPEEFVHFENKIVIRKMDARKYEESLKAELTSWVKNGLTNKA
RTVLESVHPPSVHGSVVVSSENMAIMFPLLLVKLREMEKLPAGFFLRMDQSLLHEAEHDN
LLKVLEKNLDIPQDCTYMDQKAIDAEVSPDGTTLMKILCRLWKTRRGXKLCSLLWRGSRY
HHGSMEIRQRQMVETLFRLKHIKMVTATSTLALGVNMPCKSVVFTEDSFFLDALNFRQMS
GHAGRRGEDLTGSVFFYNIPLPKTEQLLRSNVPELNDQFPLSLSWVLRCMLLVAKADDKE
DANAKALSVLQCSLMSFKQPNIKCVLKFYFIYSLQFLVTEGVPDQECVPIGYSGLVSHLH
YHEPSKFVLVSLLVKGLFHKLCVPTNIKGKQKCLFHTPKTVLHRTSVSELCKDEDSRVVL
AFKQLGDTFDRKLGRKERP
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgttgacaactgttttttcctcactgactatacaaagaagaagttagcatat
cgtgcagtatttttcaggaaaatgactaaattaatactgagtgaaatagcaaaagctaga
tattccagtttactaaatgattttgtcgaatctaacnnttttgtgattaatggagactcc
ttgcttgtcgcatgcttacatgagaagtcattcaagtttggacaagacctgtccttcttc
tacctgattgaatgctacctcataaatctaattagttaaggaggacagtttgccattgtt
ttattcaaggatgctgagcatgcacatttcaacttccgggaacttcgtgccctgagaacg
gcattaatcctccatcttcagcataataccaacatttatgttcaaacaaccttttctggg
tgcttgtcacaagagtggatcactttcctggaaggcagttgtccatattttctgattaat
gaaaagaacattgagaatgcttacttaagtatagctgtgcagatggtgaaaaggatctgc
tctgtgatggaaaaatacccagagcttcggcaggaggcagaccggcaactcatagccagg
tgcctgcggtgttcagggttcaaggagctggcgagttctttgcatccagtgcggcataaa
agagaagaaaaaggacaaatactcacagtgggccttgggccagcccggttttagctgcag
ttcatgggccaccatctggtgcatgaagagaggaaagatccagaccccagagttcaggac
tttgttcctgacaactggcagcaagagctcctggacatcatggacaagaacaagtctgca
gttatctcagccccaaagtcctctgggaagacctaagcctcctactactgcatggagagg
gtgctgcatgagggcaatgagggggtggtcgtgtatgcggcccccaccaaggcccttctc
aattaagcggcagcaaccgttgagaatcgttttaacaaaaatctgccaaatagggaaagt
ctgtgtggtgttttcacctgggactattgtcatgatgccccgaactctcagtgttcttgt
ttgcgcgtgctcatcacagtgcctgcctgctttgaaattctgctgctggctccgtaccac
cagctgtgggtgaaaaggatcagatacatcagatttgatgaggtccacagtcttggtggg
gaaattggagcagaaatctgggagcatctcctcattatccgctgccccttcctggccctt
tccaccaccatcagcaactcggagtggctacaatctgtaaaatggtactggaaacaagca
gacggtatgattgaaaaaagcattgcttctacaagaaatgccagctgccgtgccaattcc
cacaaaaattacttgctgatgaagcagtcatataaagtgagacttgtgctctatgaaaag
acctgcaatgacttagagaaatacatatgttcagtgagcaatcgtgaaatttcctttgac
tattttcacntgtgtgctgcattgacaacggaccatgtgagtgatacttctgctgtatgg
attgaaaagtttggattcccttctgatcttaccctttcacctcgagaaatggtccagctt
tatgatcctaccatgtttgaattctggaaaagttgtctcagagctcaggagttgtgtcca
gaggaattcgttcattttgagaataaaatagtcattaggaagatggatgctagaaagtat
gaagagagcttaaaggcagaactgacaagctgggtgaagaatggcctcaccaacaaggcc
agaacggtcctggagagtgttcatcctccttcagtccacggtagtgtggttgttagttca
gaaaacatggcaattatgtttccacttctccttgtaaagctaagggaaatggagaagtta
cctgcagggttttttctaagaatggatcaaagcctactccatgaagctgagcatgataac
ctactcaaggttcttgagaagaacttggatatccctcaggactgcacatacatggaccag
aaggccatcgatgctgaggtcagccctgatggaacaactttaatgaagatcttatgcaga
ctgtggaagacgagaagaggctagaagctgtgtagtctgttatggcggggcagcaggtac
catcatgggtcgatggagattaggcagagacaaatggtggagacactcttcaggctgaag
cacatcaagatggtaacagctacgtcaactcttgctttgggagttaatatgccatgtaaa
tctgttgtttttacggaagattctttttttttggatgctttaaacttccgacagatgtcc
ggccatgcaggcagacgtggggaggacctcacaggaagtgtgttcttctacaacatccca
ttacccaagacagaacagcttctgagatcaaatgtgcctgaactgaatgaccagtttcct
ctaagtctttcctgggttctcagatgcatgctgttagttgccaaggcagatgacaaggaa
gatgccaatgccaaggcattgtcagttctccaatgttcactcatgtccttcaagcaacca
aatatcaagtgtgtgttgaaattttattttatatattctttacaattcttggtcacagag
ggagtcccggatcaagagtgtgttcccattggatattctgggcttgtctcccatttacac
taccacgaaccctccaagtttgttttagtgagcttgctggtgaaaggtttatttcacaag
ttgtgtgttccaaccaacatcaaaggcaagcagaaatgccttttccacactcctaaaact
gtgcttcacaggacctcagtgagtgagttatgcaaagacgaggacagccgtgttgtgctg
gcatttaaacaactaggtgacactttcgacagaaaacttgggagaaaagaaaggccctga
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