Bos mutus (wild yak): 102271535
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Entry
102271535 CDS
T02919
Symbol
COL6A5
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(VI) chain
KO
K06238
collagen type VI alpha
Organism
bom
Bos mutus (wild yak)
Pathway
bom04151
PI3K-Akt signaling pathway
bom04510
Focal adhesion
bom04512
ECM-receptor interaction
bom04820
Cytoskeleton in muscle cells
bom04974
Protein digestion and absorption
bom05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102271535 (COL6A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102271535 (COL6A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102271535 (COL6A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102271535 (COL6A5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102271535 (COL6A5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102271535 (COL6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bom04147
]
102271535 (COL6A5)
00536 Glycosaminoglycan binding proteins [BR:
bom00536
]
102271535 (COL6A5)
Exosome [BR:
bom04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102271535 (COL6A5)
Glycosaminoglycan binding proteins [BR:
bom00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102271535 (COL6A5)
Hyaluronan
Extracellular matrix or blood plasma proteins
102271535 (COL6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Radical_SAM
VWA_CoxE
vWA_SIBA-E
Copine
Motif
Other DBs
NCBI-GeneID:
102271535
NCBI-ProteinID:
XP_005898456
LinkDB
All DBs
Position
1:148766499..148882904
Genome browser
AA seq
2606 aa
AA seq
DB search
MKILLIIFVPLFWTKTLSYQSPGPGPEYADVVFLVDSSDHLGIKSFPFVKTFINKMISSL
PIEADKYHVGLAQYSDGLHREFLLSAFKSRGPMLNHIKKNFGFLGGSLRIGKALQEVHRA
YFSSGRDRKQFPPILVVLASGESEDAVEEAAEALHKDGVRIVSVGIQGASEKTLKAMATG
QFHYRLRTVRDLSTFSQNMTQILKDAAQYKDGTAYSDIEVPFPRACKKDSIADLMFLVDE
AVGTTENLRLLQNFLKNITSSMDVQDNCLRIGLMSYSDRVETVSPLSSSTTQSEFQEQIQ
KLSLRAGKSSAGAAIDQLRRKGFSAAHGSRRAQGVPQIAVLVTDRPSDDSVREVALDLRL
QDVTVLALGIEGANKTQLEEIVSYPPEQTISMLQSYADLDNYSKKFLKKLQNEIWSQVSA
RAEQMELDKTGCVDTKEADLYFLIDGSSSIQKKHFEQIREFMLAVIRMFSIGPDKVRVGA
VQYSHEKKVEFGISDYLDDVKLRKAVFNIKQLRGGTRTGAALDFMLPLMREGRKQRMNEV
PCHLIVLTDGISGDAVLEPAERLRAENITIHAIGIGKANRTQLQQIAREEERVNFGQNFD
ALKSITNEVVRSICTEKGCESMKADIMFLVDSSGSIGPENFEKMKTFMKNLLDKIQIGED
KSRVGVVQFSHYSKEEFQLDKYFTQKEISDAIDSMSPISDNTLTGSAITFVDPYFTESKG
GRSMVKKFLILITDGEAQDDVRDPAKALRDKGVVIFSVGVYGANRTQLEEISGDGSLIFH
VEKFDDLKAIESKLIFRVCALHDCKRIQQLDVVFVLDHSGSINPEDQENMINLTIHLVKK
SDVGLDRVRFGALRYSDDPEVLFYLNKYSSKPAIIEHLRRRRDTAGRTYTAKALERANDM
FTEEHGSRIKQNVRQMLIVITDGVSHDRDKLGEAASKLRAKGVIIYAVGVGAADQAELET
MAGDKNYTIHVSGFDKLKDIYLPVQDSMCNNSQEACDIPEADVIFFCDGSDMVSDSDFVT
MTTFLSDLIDNFDIPSERMKIGMAQFGSRYQEIIELQNSLTKTEWKSRIQAITKSKGLPR
IDLALRKVGIMFEPSAGGRGSAGVPQTLVVITSGGPRYDVSKAVEALREAGICILALGIG
DVYKEQLLPITGSSEKIITFQDFDKLKNVDVKKRMIREICKSCGKTNCFMEIVVGFDIST
HLPGQPLFHGHPRLQSYLPSILEDITSIRGVSCGAGAEVQVSVAFKVNSGQNVPAEFQIY
QQTIFDSLLQVTVNGPTHLDAQFLQSMWDTFENVSTSQGQVLLIFSDGLGGESKMMLEDQ
SDRLREAGLDALLVVSLNETAHDEFSSFEFGKGFDYRTHLTIGMKELGSVLSQYLGNIAE
RTCCCQFCKCPGIPGPQGSQGPQASQGSPGVKGSRGHRGEEGEPGARGEIGPQGNRGNAG
CPGQPGQKGARGFSGYKGEHGDDGIDGLDGEEGFHGLPGKKGEKGDPGSQGSPGSRGPPG
EYGDKGFPGDPGNPGQSSTIKGQKGSKGEQGRQGRTGQKGTQGSPSSRGSRGREGQRGVQ
GALGEPGIPGPQGESGAEGLQGSQGASGPPGGKGEKGSEGRKGPQGAPGPAGDKGSVGRP
GPLGKKGEPGIPGDPGPAGQVGQRGKQGDYGIPGIGPMGGKGVKGPRGFPGDMGQKGDTG
DPGIPGGPGPKGFRGFTLTVGLKGEAGSPGSQGPPGRRGPKGMAGKPVYSQCDLIQFTRD
HSPCWKEKCPVYPTELVFALDQSNDITEQRFNEMRDIITSIVNDLHIRESNCPVGARVVV
VSYNSGTGYLIHGSDYRSKKQLLQLLSQIKYQSSGEVRDIGNAMRFVARNIFKRTPAGAN
VQRVAVFFSNGQAASRSSVITATMEFSALDISPAVFAFNEKVYLDEAFGFDNTGTFQVLS
VPPNGEYDPLERLRRCTLCYDKCFPNTCKKEIVIPENSYMDVAFLLDNSRNVASDEFKDM
KALVSSMLDNFEIASDPIVSDSGDRIALLSYSPWDRRKKNVVKTEFEFTTYNSQALMKRY
IETNLRQLNGEATIGHALLWVVENLFPATPKLRKYRVIFVVSAGENRERKEFLKKMALRA
KCQGYVIFVISLGLTSEEDMEELASHPLDHHLIQLGRIHKPNLDYVVKFLKPFVYSVRRG
FNQYPPPVLENICQLIDSEDEENQGIGLQFTPEPYEISSGENIIGQELSALRDSSFVLED
NGSDHLVYVPSQMLMPQKLMTKYEKDWNSEATASLTSGHENLGRKEEPGLTYESRDASLQ
EYYMDVTFLIDASKRIGSDEFKEVKAFVTSVLDYFHLAPDPLTSTLGDRIAVLTYSPPGY
MPNTEKCPVYLEFDLVTYNNIHQMKHHLQDSLQQLNGDVFIGHALQWTLDNVFVGTPNLR
RNKVIFVISAGETNPLDREVLRKVSLRAQCQGYSMFVFSFGPLHNDKELEELASHPLDHH
LVQLGRTHKPDLNYIVKFIKPFVHSIRRGINKYPPADMKPKCVNITSPTPENNGIGNTVF
LLPEVYEIEMENSELSGDPDSQQQHFFEIGNSHSNSSGINTNLIQRLYMLLSSGELMMQD
KKEAHSEEITSPANDRQDEKDGEDTR
NT seq
7821 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgctaattatatttgttcctcttttctggactaaaacgctgtcatatcag
agcccagggccaggccctgagtatgctgatgtggtgtttctggtggacagttccgaccac
ctgggaattaagtccttcccgtttgtgaagaccttcatcaacaagatgatcagcagcctc
cccatagaggctgacaagtaccacgtgggcctggcccagtacagcgatgggctccacaga
gagttcctgctcagcgccttcaagagcaggggccccatgctgaaccacatcaagaagaac
ttcgggttcctggggggctccctgcggattgggaaggctctccaggaggttcacagggcc
tacttctcaagcgggagggacaggaaacagtttcccccgatcctggtggtcctggcttcc
ggagagtctgaagatgctgtggaagaggccgccgaagcgctgcacaaagatggggtgagg
atcgtctctgtggggatacagggggcatctgagaagaccctgaaggccatggccacgggc
cagttccactaccgcctccggacggtcagggacctcagcacattctcccaaaacatgacg
cagattctcaaggatgcagctcagtacaaagatggaacagcctactctgatatagaagtc
ccctttcccagggcctgtaagaaagattcaattgccgacctcatgtttctggtggatgag
gccgttgggaccacagagaatctaaggctcctgcagaacttcctgaagaacatcacctcc
tccatggatgtgcaagacaactgcctgcggattggacttatgagttacagtgacagagtc
gagacggtttctcctctgagctcgagcacaacccagtctgaatttcaggagcaaatccag
aagctttctctgcgggctgggaaatccagtgctggagctgccattgatcagctgaggagg
aaaggcttctcagcagcacatggcagcagacgggcacaaggagtgccccagatagcagtc
ctggttacggacaggccgtcggacgacagcgtgcgtgaggtggccctcgacctccggctg
caggacgtaaccgtgcttgccttgggcattgaaggggccaacaagacccagttagaagaa
atagtgtcttaccctccggagcagaccatctccatgctgcagtcctacgcagacttggat
aattatagtaagaagttcttaaaaaagctccagaatgaaatatggtcccaagtctcggct
cgtgctgaacaaatggaacttgataaaactggctgtgtggacacaaaagaggctgatctc
tatttcctcatcgatggctcaagcagcattcagaaaaaacactttgagcaaatcagggaa
ttcatgttggcggtgataaggatgtttagcattggtccagacaaagttcgagttggagct
gtgcagtattcccatgagaaaaaagtggaatttggtatcagtgactaccttgatgatgtg
aaattaagaaaggctgtttttaacatcaagcaacttaggggcggaactcgtactggggca
gccctggatttcatgctgccactgatgagggagggaaggaagcagaggatgaatgaggta
ccctgtcacctcattgtgctgaccgatgggatatctggagatgctgtcctggaacctgct
gagagactaagggctgaaaatatcaccatccacgcgattggtattgggaaggctaacaga
acacaactgcaacagattgcgagggaagaggaaagggttaactttgggcagaactttgat
gctttaaaaagcatcacaaatgaagttgttcgcagtatctgcactgagaaaggatgtgaa
agcatgaaggctgacatcatgtttctggtggacagttctggcagtataggacctgaaaat
tttgagaaaatgaaaactttcatgaaaaacctgttagataagattcagattggtgaagac
aaaagccgagttggtgtagttcaattcagtcattatagtaaggaagaatttcagcttgac
aaatactttacacaaaaagaaatttctgatgcaatagacagcatgtcccccatcagtgac
aatactttgactggaagcgcaataacctttgtggatccatacttcactgagtccaagggg
ggccgctcaatggtaaaaaagtttctcatccttatcactgatggagaagcccaggatgat
gtgagagaccccgcaaaagctcttcgggacaaaggtgtggtcatcttctccgttggggta
tacggggccaacaggactcagctggaggagatcagcggggatggcagcctgatcttccat
gttgagaaatttgatgatctaaaggcaatagagagtaaactcatctttcgcgtgtgtgcc
cttcatgattgtaaacggattcagcagttagatgtcgtgttcgtgctggaccactcaggc
agcatcaaccccgaggaccaagaaaacatgatcaacctcaccatccacctggtgaagaaa
tcagacgtgggcctggaccgcgttcggtttggagcgctcagatactcagatgaccccgag
gttcttttctacctcaacaagtactcaagtaaaccagccatcatcgagcatctgaggagg
cgcagggatacggcgggaagaacctacaccgccaaggctctggagcgcgcgaatgacatg
ttcacagaggaacacggcagccgtatcaaacaaaatgtgaggcagatgctgatcgttatc
acagatggggtatctcacgacagagataagctcggtgaggcggcctcaaaattaagagcc
aaaggcgtcatcatttacgcagtgggtgtaggtgcggctgaccaagcggaactggagacc
atggcgggggataaaaactacactatccatgtcagtggtttcgacaaactgaaagatatt
tacctgcctgtgcaagacagtatgtgtaacaactcgcaagaggcctgtgacattccagaa
gctgatgtgattttcttttgtgatggctctgacatggtatctgattcagactttgttacc
atgacaactttcttgtcagacttaattgataattttgacattccatctgagaggatgaaa
attgggatggcccaatttgggagccgctaccaagaaatcatcgagttacagaactctctg
acgaaaaccgaatggaagtctcggattcaagctatcaccaagagcaagggccttccgcga
atagacttggccctgagaaaagtgggcattatgtttgagccatccgctggcggcagaggg
agcgctggtgtccctcagactttggtggtcatcacctctgggggtccccgctatgatgtg
tcaaaggcagtggaggccctgagggaagctggcatttgtattctggctctgggcatagga
gatgtttacaaggaacagctcctgccgataacgggcagttctgaaaaaatcatcactttt
caagactttgataaattaaagaatgtggatgtgaaaaaaagaatgatccgtgaaatctgc
aagagttgcgggaaaaccaactgctttatggagattgtggttggcttcgacatttccact
cacctgccgggtcagccattgttccacggccacccccggctgcaatcatacctcccaagc
atcttagaggacatcacctccatcaggggtgtcagctgcggggcaggtgcagaggtgcag
gtgagcgtggcctttaaggtgaacagtggccagaacgtccctgccgagttccaaatctat
cagcaaacaatatttgacagcctcctgcaagtcaccgtcaacgggccgactcacctggat
gcgcagttcctgcagtccatgtgggacacctttgagaatgtgtctacatcccaagggcag
gtgttactcatcttttcagatggtcttgggggtgaaagcaaaatgatgcttgaagatcaa
tcggacaggctcagggaagcaggacttgatgctttgctggtggtgtccctaaatgaaacc
gctcacgatgagttttccagcttcgaatttggaaaagggtttgactacaggactcacctg
accattggaatgaaggaactgggcagtgtgctatcacagtatctggggaacattgcagag
aggacgtgttgctgtcagttttgcaaatgcccagggattccaggacctcaggggagccaa
gggccacaagcctcccagggctctccaggtgtgaaaggcagcagaggacacaggggagag
gagggagagcctggagctcgaggagaaattggaccccaaggaaacagagggaatgcagga
tgtccagggcagccaggtcaaaagggagccagaggattttctggatataagggagaacac
ggagatgatgggattgatggactggatggggaagagggctttcatggacttcctgggaaa
aagggagaaaaaggtgatccaggttcccagggcagcccaggttccagaggcccccctggg
gaatatggggacaagggtttcccaggggatcctggtaatccaggacaaagcagtaccatc
aaaggacagaagggctccaaaggagaacaaggaagacaaggtagaaccgggcagaaaggg
acgcaaggcagtcctagctccagagggagcaggggaagagaaggccagaggggagtccag
ggtgccttgggggaaccgggcatacctggacctcaaggtgaatcaggagctgaaggattg
caaggatcacagggagccagtggacctccgggcgggaaaggagagaagggaagcgaggga
cgcaaaggacctcagggcgctcctggaccagcgggagacaaagggagtgttggaaggcct
ggtcctttggggaaaaagggagaacctgggattcctggagatccagggccagcggggcaa
gtgggacagcgaggaaagcagggtgactatggcatcccaggcattggtcctatgggagga
aaaggagtcaagggtccacgaggatttcctggagatatgggccaaaagggtgatactggt
gatcctggaattcctggggggcctggacccaaaggatttaggggattcacactcacggta
ggcctgaaaggtgaagcgggctctcctggaagccaaggcccccctggacggagaggccct
aaaggaatggcagggaagcccgtatattctcaatgtgatctaatccagttcacgcgggac
catagtccttgttggaaagaaaagtgtcctgtgtatccaacagagctggtatttgccctg
gaccagtccaacgatatcacagagcagagatttaatgaaatgagggacatcatcacttct
attgtcaatgaccttcacatcagggaaagtaattgccccgtgggagccagagttgttgtg
gtttcctacaactcgggcaccggctacctcatccatgggtctgactaccgtagcaagaaa
cagcttcttcagcttctctcccaaataaaatatcaaagttctggggaagtccgagacatt
gggaacgcgatgaggtttgtggctcggaacatctttaagcggacgcctgcaggagccaat
gtgcagagagttgctgtgttttttagcaacggacaagctgcgagcaggtcatccgtcatc
acagccaccatggagttcagtgccttggatatcagtcctgcagtcttcgcttttaatgaa
aaggtttacctcgatgaggcttttgggtttgacaacacaggaacatttcaggtgctttct
gttcctccaaatggggaatatgatccattagaaaggcttcggcgctgtacactttgctat
gataaatgttttccaaatacttgcaagaaagaaattgtcatacctgaaaattcatacatg
gatgtcgccttcctcttagacaattctagaaatgtagcaagtgatgagtttaaggatatg
aaagccttggtgagctcaatgcttgacaactttgaaattgcctcagaccctatagtctca
gactctggtgataggattgccttgttgagctattctccttgggataggagaaagaagaat
gtggtaaaaacagagtttgagtttacaacttataacagtcaagctctgatgaaaaggtac
attgagactaacctccgacagctaaatggggaagccaccattggccatgccctactgtgg
gtcgtggagaatctcttcccagcaacgcccaagctaagaaaatacagggtcatctttgtg
gtctctgctggagagaatcgtgagagaaaggaattcttaaagaagatggctctgagggcc
aagtgtcaaggctatgtcatatttgtgatttccctgggtttgacatccgaggaggacatg
gaggagctggccagccacccgcttgatcaccatctgatacagctggggagaattcataaa
ccaaatctggattatgttgtgaagtttttaaagccgtttgtgtactcagtgagacgagga
ttcaatcagtacccaccaccagtgcttgagaacatctgccaactcattgattcagaagac
gaggaaaatcaaggcatcggtctccaatttactcctgaaccttatgagatttcttcagga
gagaacatcattggccaggaattgagtgctctgagagattcatcttttgtattggaggac
aatggaagcgaccatttggtttatgttccaagccagatgcttatgccacagaaattaatg
actaagtatgaaaaagattggaattctgaagcaactgcaagtctcacatctggacatgaa
aaccttggcagaaaagaagaaccaggtcttacttatgaaagtagagatgcctctcttcaa
gaatattacatggatgtgacttttctcatagatgcttccaaaagaataggaagtgatgag
tttaaggaagtgaaagcttttgtaacctcagtgcttgattattttcatctggccccagat
ccactgacctccaccttaggagacagaatagcagtcctgacctactctcctccaggctat
atgcccaacacagaaaaatgccccgtctacctagaatttgatttggtcacttataacaat
atacaccaaatgaaacatcatctccaagactcccttcagcagctcaatggagatgttttt
ataggccacgcccttcagtggacacttgacaatgtctttgtaggaactcccaacctgagg
agaaacaaagttatctttgttatatccgctggtgaaaccaaccctttagacagggaagtc
ttaagaaaggtatctctgagagcccagtgtcagggctactccatgtttgtgttttctttt
ggtcctctacacaatgacaaggaattagaagaattagccagccacccactggatcatcac
ttagtccagcttggccgaacccacaagccagatttgaactatatcgtcaaatttatcaag
ccatttgttcattcaatcagacgtggcatcaacaaatacccccctgcagacatgaaaccc
aaatgtgttaacatcacctctcccactccagagaataatggcataggaaacactgtattc
cttcttcctgaggtatatgaaattgagatggagaacagtgagctttcgggtgaccccgat
tcccagcagcagcatttctttgaaatagggaacagtcatagtaacagttctggtatcaac
actaatttgattcagaggttatacatgctcctttcatctggggaactgatgatgcaagac
aagaaagaggcacattcagaagaaattacatctccagcaaatgacagacaagatgaaaaa
gatggtgaagacacaagatga
DBGET
integrated database retrieval system
