Bos mutus (wild yak): 102271607
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Entry
102271607 CDS
T02919
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
bom
Bos mutus (wild yak)
Pathway
bom04151
PI3K-Akt signaling pathway
bom04510
Focal adhesion
bom04512
ECM-receptor interaction
bom04820
Cytoskeleton in muscle cells
bom04926
Relaxin signaling pathway
bom04933
AGE-RAGE signaling pathway in diabetic complications
bom04974
Protein digestion and absorption
bom05146
Amoebiasis
bom05165
Human papillomavirus infection
bom05200
Pathways in cancer
bom05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102271607 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102271607 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102271607 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102271607 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102271607 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
102271607 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102271607 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
102271607 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102271607 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
102271607 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102271607 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bom04147
]
102271607 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
bom00536
]
102271607 (COL4A5)
Exosome [BR:
bom04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102271607 (COL4A5)
Glycosaminoglycan binding proteins [BR:
bom00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102271607 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102271607
NCBI-ProteinID:
XP_005910900
LinkDB
All DBs
Position
X:108331330..108585885
Genome browser
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLSLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGTPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPPGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGLPGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGDKGDRGFPGIQGPPGLPGPPGPAVIGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGPPGPPGPPGPHIPPSDKICEAGPPGPPGSPGDRGLQGEQGMKGDKGDT
CFNCIGTGVSGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGATGPKGLSGIPGAPGAPGF
PGPKGEPGDILTFPGMKGDKGDLGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGMAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGVQGGAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGHPGRDGEVGLPGEPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGSPGRIGLEGPSGPPGFPGPKGEPGFGLPGPPGPPGLPGFKGILGPKGDRGFP
GPQGPPGQAGLDGLPGPKGDIGPNGQPGPIGPPGLPGTGFQGPPGPPGIPGPIGQPGLHG
LPGEKGDPGPPGFDVPGPPGERGSPGIPGAPGPMGPPGSPGLPGKAGASGFPGAKGEIGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGLPGPMDPDLL
GSKGEKGDPGLPGIPGVAGPKGYQGLPGDPGQPGLSGQPGLPGLAGPKGNPGLPGMPGLT
GPPGLKGNMGDMGFPGPQGPKGSFGPPGVPGQPGSPGLPGQKGEKGDPGISGIGLPGLPG
PKGEPGLPGYPGNPGTKGSMGETGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGISGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDEGLPGIPGNPGLPGPKGEPGFHGFPGLQGPPGPPGSPGPALEGPKGSPGPQGPP
GRPGPPGPEGPRGLPGSGGIKGERGNPGQPGQPGLPGLKGDQGPPGLQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGVPGSTGPEGDPGLIGPPGPPGLPGPSGQSIVIKGDAGPPGI
PGQPGLKGLQGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPQGTIQVYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgtccttactggccctgagtctttgg
gggcagcccgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgt
agtggtataaaaggagaaaagggggagagaggatttccaggtttggaaggccacccaggt
ttgcctggatttccaggtccagaagggcccccagggcctcggggacaaaagggtgatgat
ggaactccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccgggtagt
ataattatgtcatccctgccaggaccaaagggtaatccaggctatccaggtcctcctgga
attcaaggcccagctggtccccctggtataccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggcccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaagggtgagaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacaaaaaagaccaatcgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacccccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaacca
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaaccaggaagagatggagaaaagggtcaaaaaggtgacactggcctacctggg
cctcctggacttgtaatacctaggcctgggactggtgtaactgtaggagaaaaaggaaac
attgggttacctggcttgcctggagataaaggagatcgaggatttcctggaatacaaggt
ccacccggccttcctggacctccaggacctgcagttataggtcctcctggaccccctggc
tttcctggggaaaggggccagaaaggtgatgaaggcccacctggaatttccattcctgga
tctcctggacttgatggacagcctggggctcctggtcctcctggcccccctggccctccc
ggccctcacatccctcctagtgataagatatgtgaagcaggccctcctggccctccagga
tctccaggtgatagaggactccaaggagaacaaggaatgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtgtttcagggcctccaggtcagcctggtttgccaggt
cttccaggtcccccaggatctcttggtttccctggacagaagggcgaaaaaggacatgct
ggtgcaactggtcccaaaggattatcaggcataccaggagctccaggtgctccaggcttt
cctggacctaaaggtgaacccggtgacatcctcacatttccaggaatgaagggtgacaaa
ggagatttgggttcccctggagctccagggcttcctggtttacctggcacccctggacag
gatggattgccaggacttcctggccccaaaggagaacctggtggaatggcttttaagggt
gaaagaggtccccctgggaacccaggtttgccaggtctcccaggaaatagggggcctatg
ggccctgttggttttggtcctcctggtccagtaggtgaaaaaggcgtccaaggtggggca
ggaaatccaggccaaccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
caaccagggaagcctggcctgcctggtcacccaggcagagacggtgaagtaggtcttcca
ggtgaacctggactcccaggccagccaggcttgccaggaatacctggtagcaaaggagaa
ccgggtatccctggaatcgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctggatcacctggaagaattggtctagaaggtccttctggg
ccaccaggctttccaggaccaaagggagaaccaggatttgggctacctgggccacctggg
cctccaggactcccaggtttcaaaggaatacttggtccaaaaggggatcgtggtttccca
ggacctcaaggtcctccaggacaagctggcttggatgggctacctggaccaaaaggtgac
attggaccaaatggacaacctgggccaattggacctcctgggctgccaggaacaggtttt
cagggaccaccagggccaccaggaattcctggaccaataggccaacctggcttgcatgga
ctaccaggagagaagggggatccagggcctcctggatttgatgttccaggacctcctggt
gagagaggcagcccagggatccctggagcaccaggtcctatgggacccccaggatcacca
gggctcccaggaaaagcaggtgcctctggctttccaggtgccaaaggtgaaatcggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgatgatggtttgcagggtcagccaggacttcctggccctgcaggagagaaa
ggtagtaaaggagagcctggccttccaggccttcctgggccaatggatccagatctgctg
ggctcaaaaggagagaaaggggaccctggactaccaggtattcctggagttgcagggcca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttgccaggactagcaggtcccaagggtaaccctggtctccctggaatgccaggacttaca
ggacctcctggactgaaaggaaacatgggtgatatgggttttccaggcccacagggtcca
aaagggtctttcggacctcctggagttcctggacaacctggctccccaggactacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgcctggatacccagggaaccctggtaccaaaggttctatg
ggagaaactggtttgcctggattaccggggacccctggagcaaaaggacaaccaggcctt
cctggattccctggaaccccaggccttcctggaccaaaaggtattagtggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcctgggccacca
gggcctccaggtgaaaaaggcaaaccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatgaaggattacctggcattccaggaaaccctggccttccaggt
ccaaagggtgaaccaggctttcatggtttccctggtctgcagggtcccccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcagccctggaccccaaggtcctcct
gggagaccaggtccaccaggtccagaaggtccccggggtctacctggaagtgggggtatt
aaaggagaaagaggtaacccaggccaacctgggcaacctggtttgcctggtttgaaaggt
gatcaaggtcctccaggactccagggtaaccctggccggccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaaaggacccagtggagta
cctggttcaactggccctgagggggatccaggacttattggcccaccaggtccccctgga
ttacctggtccttcaggacagagtattgtaatcaaaggagatgctggcccaccagggatt
ccaggccagcctggattaaaaggtttacaaggactcccaggacctcagggtttaccaggt
ccaattggccctccaggagatcctggacgcaatggactccctggctttgatggtgcagga
ggacgcaaaggagacccaggtttgccaggccagccaggtactcgtggcttggatggtccc
cccgggccagatggattgcagggtcctccaggtccccctggaacctcttctattgcccat
gggtttctcatcacacgtcacagccagacaacagatgctccacaatgcccacagggaacc
atccaggtgtatgaaggcttttctctcctgtatgtacaaggaaataaaagagctcatggt
caagacttgggaacagccggcagctgccttcgtcgtttcagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgattattcttactggctctcc
accccagagcccatgccaatgagcatggaacccctgaaggggcagagcatccagccattc
attagtcgatgtgcagtatgtgaagctccggccgtggtgattgcagtccacagtcagacc
atccagattccccgttgtcctcagggatgggattctctctggattggttattccttcatg
atgcacacaagtgcaggggcagagggctcaggccaagccctggcctcccctggttcctgc
ttagaagagtttcgttcagctcccttcattgagtgtcatgggcgggggacctgcaactat
tacgccaactcctacagcttttggctggcgactgtagatgtgtcagacatgttcagcaaa
cctcaatcagaaacgctgaaagcaggagacttgaggacacgtattagccgatgtcaagtg
tgcatgaagaggacataa
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integrated database retrieval system
