Bos mutus (wild yak): 102271608
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Entry
102271608 CDS
T02919
Symbol
PALB2
Name
(RefSeq) LOW QUALITY PROTEIN: partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
bom
Bos mutus (wild yak)
Pathway
bom03440
Homologous recombination
bom03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102271608 (PALB2)
03460 Fanconi anemia pathway
102271608 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bom03400
]
102271608 (PALB2)
DNA repair and recombination proteins [BR:
bom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102271608 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
102271608 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
BURP
Motif
Other DBs
NCBI-GeneID:
102271608
NCBI-ProteinID:
XP_005910962
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Position
25:20721025..20745696
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AA seq
1195 aa
AA seq
DB search
MLFLLAAGQMEEPPGKTLSCEEKEKLKEKLAFLKREYTKTLARLQRAQRAEKLKSPLRRA
VEEREPALRQGVAAQLAHTEPKNTVSPRDTLQINTHVDEETGEKTPSSLDIKPELFSSGR
VSVEGSRIQGSDDNQNHFPFRVNGPDAKKRQNKLLGRRKKEERTYISQERESLXDIDSLI
LSGKRLKEQEKMNRENPRTPVTELRTYPLSSPKCAIPNSPAPVTETNVGSVLILPSPKPR
RDVDALRRGNDFPRATTLPLPTPSNSSNSQRLEHKCPKSNCELTTHSLRNISSASPVNLE
VQKKKITVSTDNPEVNKAGSTSGQAARSPNLEADNSCFINELTWDNLVENENQNLKEQNH
TEMSLKSPNDALGGRNESLLEKEVLSQSKNLSLEVISPVSTEDQIHSCTVLEGLLFPAEY
YVRTTRRMSGCQRKVALEAVIQSHLGVRKKGFKNKSMKSAKKFNVCNEKTKQSEIKVSDK
HAEQPSSRSPQKLLSLTEVSFSTDSTEDDFSRKTVTKPSGKKCRGRRKSACTSLLDHHEL
LLPTTGTSGVKKSKEEIALHKDQNEKAIVHSKKRIKGKEGHCQKEDFLCYSNYAYFSSDD
DAFSAPFRKNRMLSLKHLSSFLKITDFQLPDEDFGSLKLEKLKSCSKKLMETFGSKVHGE
GHLKGESYIVVEEPSPKQSNIEKEGMEEELITLPGKAHPKMPSQRSQPRGKDLSSSILLF
TPLNSVASDDNDRLTAELCSPAFPILGATPAFGSQAHREKVSAEVVGQTCSPPRLSHLKA
TVSLAGNRKQGNSWSRPSKLDSSQHVAGRAGQPSCDPDSGPQATTLPTESFTYEASQLQE
SQTHSAEQTEIAEVPAWGSLHPGTLHVVSNLKNPSGSCSVDMSATWWEIAGFKEPCIVTA
CEYVVSLWKPLDAWQWEKIYSWHFTEFPVLQIVAVPDVCNLVCVALGNLEIREIRALLCS
PDGKSEKQVLLSSGNIKAVLGLAKRRLVSSSRTLCDQQVEMMTFAEDGGSKEKQLLMPPE
ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDASYQASVCHKAYSEMGLL
FVVLSHPCAEENELSGSPVFQLIVINPKTTLSMGVMLYCLPHGQAGRFLEGDVKDHFAAA
VLTSGTIAVWDLLLGHCTALLPPVSGQNWSFVKWSRTDSHLLAGQKDGNIFVYRF
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgctctttttgttggccgccggtcagatggaagagcctcctgggaaaaccctcagctgt
gaagagaaggaaaagttgaaagaaaaattagcattcctgaaaagggaatacaccaagaca
ttggcccgccttcaacgtgcccaaagagccgagaagcttaaaagccctcttaggagagca
gtggaagagcgagagcccgcgctccggcagggagtcgcagcacagctggcccacacagaa
cctaaaaatacagtatctcctcgtgacacgttgcaaatcaacacccatgtcgatgaagaa
actggagaaaagacacccagctcacttgacattaagcctgagttgtttagctctggacgt
gtctcagtggaaggatcacgcatacaaggatcagatgataatcagaatcattttcctttc
agggtcaatggccctgatgctaagaaaaggcagaataagctgctggggagaagaaagaaa
gaggagagaacatatatttcacaggagagagaatctctcnntgacattgattcgctcata
ctctctggaaaaagactaaaggaacaggaaaaaatgaatagagaaaatcctagaacacct
gtaactgaactaagaacttaccccctttcaagtcctaaatgtgccattccaaattctcca
gcaccagttacagaaactaatgtagggagtgtattaattctaccaagccccaaaccacgg
agagatgttgatgccctccgtagaggaaatgatttccccagggcgactactcttcctctg
cctacaccttcaaatagcagtaacagtcagcgcctcgaacacaagtgtcctaaaagtaac
tgtgaacttactactcacagcttaagaaacattagctctgcttcacctgtaaacttagag
gtacagaagaaaaaaattactgtctctacagacaacccagaggtaaacaaagctggaagt
acaagtggccaggcagctagaagtcctaacttagaggcagataattcatgttttataaat
gaactcacttgggataacttagtggaaaatgaaaaccaaaacttaaaagaacaaaatcac
acagagatgtctcttaaatctcccaatgatgctctcggtggtagaaatgaaagtcttctg
gaaaaggaagttctaagtcagtctaagaatcttagcctggaagtaatttctcctgtttct
acagaagatcaaatacattcttgcacagtgcttgaaggccttctctttcctgcagaatat
tacgttaggacaacacggcgcatgtcaggttgccagaggaaagtagcactggaggctgta
attcagagtcatttaggtgtcagaaaaaaaggctttaaaaataagagtatgaaatctgct
aaaaaattcaatgtttgcaacgaaaaaactaagcaaagtgaaattaaggtgtctgacaaa
cacgcagaacaaccaagttcaagaagtccccagaaactgctctcattaactgaagtcagc
ttttccactgactccacagaagatgacttttctaggaagacggttaccaagccatcaggt
aaaaaatgcagaggaagaagaaagtcagcgtgcacttctctgttagatcaccatgaacta
cttttgccaactactggcacatcaggtgttaagaagtccaaggaagaaattgccttgcac
aaagatcagaatgaaaaggcaattgttcacagtaagaagagaattaaaggaaaggaaggt
cactgtcaaaaagaggacttcctttgttacagtaattacgcttatttctcttcggatgat
gatgctttcagcgctccatttcgtaagaacagaatgctaagtttaaagcatctgtcgtct
tttctcaaaatcacagactttcagttacctgatgaagactttgggtctcttaagcttgaa
aaactgaagtcctgctcaaaaaagctgatggagacttttggatcaaaagtacatggagag
gggcatcttaaaggggaaagttacattgttgtggaggaaccaagccctaaacaaagcaat
atagaaaaggagggcatggaagaggaactaattaccctaccaggaaaggcacatcctaaa
atgccaagccaaagaagccagcctcggggaaaggacctttcttcatccattttacttttt
actcctttgaattctgttgcctctgatgataatgacagactgacagcagagctgtgctca
cctgctttccccatattaggcgctactccagcttttggctcccaagctcacagagaaaag
gtgtctgcagaggtggttggacaaacctgctctccaccccgtctttctcacttaaaagcc
acagtcagcctggctggcaatcgtaaacaaggcaacagctggagcagaccctcgaaatta
gatagcagccagcatgtggcaggaagagcaggacagccttcctgtgaccctgactctggt
ccccaagcaacaactctgcccaccgagtctttcacctatgaagcaagtcagctccaggaa
tcacagacacattctgctgagcagactgaaatagcagaggttcctgcttggggtagctta
cacccaggcaccctacacgtggtttcaaacttaaagaatccttcaggttcttgttctgtg
gatatgagtgccacgtggtgggaaatagctggtttcaaagagccgtgtatcgtaactgct
tgtgaatacgtcgtttctctttggaaacctctggatgcttggcagtgggaaaaaatttat
tcctggcacttcacagagtttccggtattacagatagttgcagtgcctgatgtttgcaat
cttgtgtgtgtggctttgggaaatttggaaatcagagaaatcagggcactactttgttct
cccgacggtaaaagtgaaaagcaagtgctcctgagttctggaaatataaaagctgtgctt
ggcctggcaaagaggaggctcgtcagtagcagtaggaccctttgtgatcagcaagtcgaa
atgatgacatttgccgaagatggaggaagcaaagaaaaacagcttttgatgccccctgaa
gagaccatactaacttttgctgaagttcaagggatgcaggaagctctgcttggtaccact
ataatgaacaacattgttatttggaacttaaaaactggtcagctcctgaaaaagatgcac
atcgatgcttcctaccaagcttcagtctgtcacaaagcttactctgaaatggggctcctg
tttgttgttctgagtcacccttgcgccgaagagaacgagttatcgggaagccctgtgttt
cagctgattgtgattaacccgaagacaaccctgagtatgggtgtgatgctctactgcctt
cctcacgggcaagctggaaggttcctggaaggcgacgtgaaagaccattttgcagcagca
gtattgacttctggaaccattgccgtgtgggacttactcttgggtcactgcactgctctc
cttcctcctgtctctggccagaattggtcttttgttaaatggtcacgtacagattctcat
ttgttggctggacaaaaagatggaaatatatttgtataccgcttctaa
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integrated database retrieval system
