Bos mutus (wild yak): 102271701
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Entry
102271701 CDS
T02919
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
bom
Bos mutus (wild yak)
Pathway
bom04140
Autophagy - animal
bom04148
Efferocytosis
bom05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102271701 (VPS16)
04148 Efferocytosis
102271701 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102271701 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bom04131
]
102271701 (VPS16)
Membrane trafficking [BR:
bom04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102271701 (VPS16)
Hops complex
102271701 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
102271701
NCBI-ProteinID:
XP_005894001
UniProt:
L8IMN5
LinkDB
All DBs
Position
13:complement(36803955..36832123)
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AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKPA
SARPVLEIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTVCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRVFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLPQAVQQCIEAAGHEHWPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILSGQNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNETEMSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggattgctacaccgcgaactggaacccactcggggactctgctttttaccggaaatat
gagctgtatagcatggactgggacctgaaggaggaactgagggactgcctagtggctgct
gcaccctatggggggcccattgcactgctgaggaacccctggcggaaggagaagcccgcc
agtgccaggccggttctcgagatctactcagcttccgggatgcctctggccagtctgttg
tggaagagtgggcccgtggtgtccctgggctggtcagctgaggaggagctgctctgcgtg
caggaagacggagttgtgctggtttacgggctgcatggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggttctggatgcccggatcttccatactgagttt
ggttctggggtggccatcctcacaggagctcaccgcttcaccctcagtgccaacgtgggt
gacctcaaactccgccggatgccagaggtgccaggtctgcagagtgcaccctcatgctgg
accacagtgtgccaggaccgagtggcgcacattctcctggctgtaggacctgatctttac
ctcctagaccatgcagcctgctctgcggtgacaccccctggcctggccccaggagtgagc
agcttcctgcagatggctgtctccttcacctacagacacctggcgctcttcacagacaca
ggctacatctggatggggacagcatctctcaaggagaagctgtgtgagttcaactgcaac
atccgggcccccccgaagcagatggtctggtgtagccgtccgcgcagcaaggagagggct
gttgtggtggcctgggagaggcggctaatggtggtgggcgatgcccctgagagcatccag
ttcgtgctagatgaggactcctacctggtgcctgagttggacggggtccgagtcttctcc
cgcagtacccacgagttcctgcatgaggttccagtggccagtgaggagatctttaaaata
gcctcgatggcccctggagcgctgttgttggaggctcagaaggagtatgagaaagagagc
cagaaggcggacgagtacctgcgggagatccaggagctggggcagctgccccaggctgtg
cagcagtgcatcgaggctgcaggacacgagcactggccagatatgcagaagagtctgctc
agggcggcctccttcggaaagtgtttcctggacagatttccacctgacagctttgtgcgc
atgtgtcaggaccttcgtgtactcaatgctattcgggactatcacatcggaatccccctc
acctatagccaatacaagcagctcactatccaggtgttgctagacaggcttgtgttgcga
aggctttaccccctggccattcagatatgtgagtacctgcggcttcctgaagtgcagggc
gtcagcagaatcctggcccactgggcctgctacaaggtacaacagaaggatgtgtctgac
gaggatgttgctcgggccattaatcagaagctgggggacacgcctggtgtctcctactct
gacattgctgcacgagcctatggctgtggccgcacggagctggccatcaagctgctggaa
tatgagccacgctctggggagcaagttccccttctcctgaagatgaagaggagcaaactg
gcactaagcaaggccatcgagagtggggatactgatctggtgttcacagtgctgctgcac
ctgaagaatgagctgaaccgaggagattttttcatgacgcttcggaaccagcctatggcc
ttaagtttgtaccgacagttctgtaagcatcaggagctggagacactgaaggacctttac
aaccaggatgacaaccaccaggagctgggcagcttccacatccgagccagctacgctgca
gaggagcgaattgaggggcgagttgcagctctacagacggcagccgacgccttctacaag
gccaaaaatgagtttgcagccaaggctacagaggatcagatgcggctcctacggctgcag
cgacgcctagaagatgagctggggggccagttcttagacctgtctctacatgacacggtc
accaccctcattctcagtggccaaaacaagcgtgcggagcagctggcacgtgactttcgc
atccctgacaagaggctctggtggctgaagttgactgccctggcagatttggaagactgg
gaggagctagagaagttttctaagagcaagaaatcacccattggctacctgccctttgtg
gagatctgcatgaagcaacacaataaatatgaggccaagaagtatgcttcccgtgtgggt
cctgagcagaaggtcaaggccttgcttcttgttggggatgtggctcaggctgcggacgtt
gctattgaacaccggaatgagacggagatgagcctcgtattgtcccactgcactggagcc
acagatggggccacagccgacaagattcaacgggcccgggcacaagcccagaagaaatga
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