Bos mutus (wild yak): 102272072
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Entry
102272072 CDS
T02919
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
bom
Bos mutus (wild yak)
Pathway
bom04151
PI3K-Akt signaling pathway
bom04382
Cornified envelope formation
bom04510
Focal adhesion
bom04512
ECM-receptor interaction
bom04820
Cytoskeleton in muscle cells
bom04926
Relaxin signaling pathway
bom04933
AGE-RAGE signaling pathway in diabetic complications
bom04974
Protein digestion and absorption
bom05146
Amoebiasis
bom05165
Human papillomavirus infection
bom05200
Pathways in cancer
bom05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102272072 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102272072 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102272072 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102272072 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102272072 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
102272072 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
102272072 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102272072 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
102272072 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102272072 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
102272072 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102272072 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bom04147
]
102272072 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
bom00536
]
102272072 (COL4A6)
Exosome [BR:
bom04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102272072 (COL4A6)
Glycosaminoglycan binding proteins [BR:
bom00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102272072 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102272072
NCBI-ProteinID:
XP_014338837
LinkDB
All DBs
Position
X:complement(107993128..108329994)
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AA seq
1706 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCSGGCKCSPEKGARGRPGPIGIQGP
TGPQGLPGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYSGLPGPPGLPGQKGSKGEPVLAQGSFKGMKGEPGLPGLD
GITGPQGAPGSPGAVGPRGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPQGFPGVSGPPGLPGFGIAGEKGEKGIPGLPGPRG
PMGLEGVQGPPGSQGRKGSSGFPGLNGFPGIKGEKGGIGLPGPDIFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGPQGALGLKGERGNTGRTTTGAA
GLPGRDGLPGLPGLPGPPGAASETGTLQSTEPGSPGLRGERGPKGHPGLKGIKGDPGFCA
CDGGVPNMGPPGEPGLPGPPGLLGLPGLKGTKGDPGSGGAQGPSGDPGVFGPRGPTGPKG
KKGDPTLSTRSGMPGEQGDPGPQGLPGETGAPGKDGIPGLPGLPGLLGDGAQGFPGEKGL
PGLPGEKGHTGPTGPPGIGLPGAPGPRGLPGDKGVDGLPGQPGPRGVPGDCCCKEEVGKT
DLDTEGGITLPCIIPGPYGPSGLPGAPGFPGPKGARGLPGAPGQPGLRGNKGDPGSPGLV
HLPELSGFPGPHGEKGLPGFPGLPGKDGLPGKVGSPGLPGPKGAPGDILGAENGAPGEQG
LQGLPGDRGFPGDSGLPGLKGLLGKSGLLGPKGERGSPGIPGRVGQPGPPGPSGLFGIKG
KPGLRGPPGFPGISGHPGKKGPRGEIGLPASAGKRGLPGLKGLPGPPGPIGFLGNSGLPG
ATGLPGLPGLKGEKGSVGLTGFPGIPGLPGIPGASGLKGIPGSTGRVGPSGWAGSPGEKG
DRGDPGPFGIPSHRPPMLNLRFKGDKGSQGSPGAIGFPGPRGDKGEAGHPGPPGLPGAPG
FPSLIKGLSGRPGPPGSTGLRGLPGLKGYPGIAGFQGIPGESGSQGLSGIPGLPGASGLP
GLKGDQGQTLGISGSPGPKGQPGESGFKGVKGKDGPVGDVGFPGNKGEDGKVGISGDVGL
PGSLGLPGVAGMRGNPGLPGSPGHPGATGPLGPPGLIGTKGFPGLPGLHGLNGLPGTKGT
HGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGIRGPKGSQGFPGLQGAAGLPGA
LGLSLPSVIEGQPGDPGRPGLDGERGRPGPPGPPGPPGPASDQGDPGDPGFPGIPGPQGP
KGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGA
PGHTPIAEAIQAPPGPMGLPGIDGIPGLMGDPGVQGPVGLQGSKGLPGIPGKDGASGLPG
PPGALGDPGLPGLQGPPGFEGAPGKPGPFGRAGVPGQSLRVGYTLVKHSQSEQVPLCPSG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWL
STTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGE
EPVSETLKAGQLHTRVSRCQVCMKSV
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgcttctggttactttgtgcctgaccgaggaactggcagga
gcgggagagaagaagccctatgggaagccatgtgggggccaagactgcagtgggggctgt
aagtgctctcctgagaaaggagccagagggagaccaggaccaattggaattcaaggtcca
acaggtcctcaaggacttcctggccctagtggtttatcagggttaaaaggagaaaggggc
tccccaggcccgctgggaccgtatggaccaaaaggcgataagggtcccatgggtgttccc
ggctttcttggcatcaatggaattccgggccaccctggacagccaggacccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tattctgggcttcctggaccacctgggcttcctggtcagaaaggctctaaaggtgaacct
gtccttgcccaaggtagtttcaaaggaatgaagggggagcctgggctgcccggactggat
ggaatcactggcccacaaggagcacccggatctccaggagctgtaggacccagaggacca
ccaggattgcaaggtcctcctggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggagatgttggcctgcctggtcctgcagga
cccccaccatctactggagaactggaattcatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcctcagggcttcccaggagtaagtggtccacctggtctgccggga
tttggaattgctggagaaaaaggagaaaagggaattcctggtttgccaggacctaggggt
cccatgggtttagaaggagtccaaggccctccagggagtcagggcaggaaggggtcttca
ggtttccccgggcttaatggattcccaggaattaagggtgaaaaaggtggcattggcctg
ccaggcccagatattttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cctggtatgccaggcctcccaggccttaaaggagatgaaggcatacagggcctacctggc
cctcctggcgcccctggattaccagctttaccaggtggccccggtgctctggggccccag
ggagctctaggcctgaagggggaacgaggaaacactggccggaccacaacgggggcagct
ggtctccctggcagagatggtttgccaggcctgccaggcctaccaggcccacctggtgca
gcatctgagacgggaaccctacagagcacagaaccgggatcgccgggactccgaggggaa
cgaggtccaaaaggacacccaggcctcaaaggaattaaaggggacccaggtttttgtgct
tgtgatggtggtgtccccaacatggggccacctggggagccaggcctgcctgggccacca
ggacttctgggccttccaggtcttaaaggaaccaaaggtgatccaggctctgggggtgca
cagggcccatcaggggatccaggtgtatttgggcctcgaggtccaacaggccctaaagga
aagaaaggggacccaactctcagtacaagatcagggatgccaggagagcaaggtgatcct
ggcccccaggggctccctggtgagacaggagccccaggcaaggatggaataccaggttta
ccagggctgccaggccttctgggtgatggtgcacagggcttccccggtgaaaaggggtta
ccaggacttcctggtgaaaaaggccacactggtccaactggccccccaggaattgggcta
ccaggggctcctggacctcgtggacttcctggagataaaggagtagatggattaccaggg
caaccaggcccccgtggagttccaggtgactgctgctgcaaggaggaggttgggaaaaca
gacttagacacagagggaggtatcaccttgccttgtattattcctggaccgtatggtcca
tcaggactcccaggagctcccggattcccaggccctaaaggggcccgtggcctccctggg
gctccaggccaacctggattgcgtggaaataaaggggaccccggaagtccaggattggtt
cacctgcctgaattgtcagggtttcctggacctcatggagagaagggcttacctgggttt
cctgggctccctggaaaagacggcttgcctgggaaagttggcagccccggcttaccaggt
cccaagggagcccctggtgacatccttggtgctgaaaatggtgctccgggggagcaaggc
ctacagggactgcctggggacagaggatttcctggagactctggccttccaggactcaag
ggtttgcttgggaagtcgggcttgctcggccccaaaggtgagcggggcagccctggaata
ccaggccgtgtgggtcagccaggacccccaggccctagtggtctatttggcatcaagggc
aaacccgggctccgcggacccccaggctttccaggcatttcaggacatcctggaaagaaa
ggtccaagaggcgagataggtctccctgcgtcagctggaaagagaggcctgcctgggctg
aaagggcttccgggaccgccagggccaattggcttcctggggaactcaggcttgccaggg
gccactgggttaccaggcctgccaggtctgaagggtgagaaggggtctgttggactgaca
ggttttccagggattccaggtctccctggtattcctggagcaagtggattaaagggaatt
cctgggtcgacaggaagagtggggccatctggatgggctggtagccctggtgaaaaagga
gacagaggtgacccaggcccctttgggatacccagtcatcgacctccaatgctgaacctc
cgcttcaaaggagacaaaggttctcagggctcacctggagccattggatttcctggaccc
agaggtgacaaaggagaggctggccaccccgggccaccaggcttgcctggagctcctggc
ttccccagcctcatcaagggacttagtgggagaccgggcccccctggctccacaggacta
cggggcttacctggcctgaaggggtaccctggaattgcaggtttccaaggaattccagga
gaaagtggttcacagggtctcagtggaattcccgggctaccaggagcatctggtctccca
ggtttaaaaggagatcaaggccagacacttggaatttctggtagcccaggacccaaggga
caacctggggagtctggtttcaaaggtgtgaaaggaaaagacggaccagttggtgatgtg
ggtttcccaggaaacaaaggtgaagatgggaaagttggtatttctggagatgttggcctt
cctggctccctaggactccccggagttgcaggcatgagaggaaatccagggcttccaggt
tctccaggccacccaggggcaactgggcccctgggtccccctggcctaataggaaccaaa
ggtttccctggacttccaggtttacatggactgaatgggcttccaggaaccaaggggact
catggaactccaggacctagtataaccggtgtgcctgggccagctggcttgcctggtccc
aaaggggaaaaaggttctccaggaattggcatcggagccccaggaaagccaggtataaga
ggacccaaaggtagtcaaggttttccaggtctccagggcgccgctggtctccccggtgca
ctgggcctctccttgccttcagtcatagaaggacagcctggtgaccctgggcgaccaggc
ctagatggagaacgaggccgcccaggccctcctgggcccccaggcccccctgggcctgcc
tcagatcaaggcgaccctggagaccctggcttccctggaattcctggccctcaagggccc
aaaggagaccaaggaattccaggtttctctggcctccctggagagctaggattgaaaggc
atgagaggtgagcctggcttcatggggactccaggcaaggttggaccacctggagaccca
ggacttcccgggatgaaggggaaggcggggccaagaggcttatccggccctcgaggtgct
cctggacacacacccattgcagaagccatccaggctccccctggacccatgggtcttcca
ggcattgatggaatccctggcctcatgggagaccctggggtccaaggacctgtgggccta
caaggatctaaaggtttacctggcatccctggcaaagatggcgccagtggactccctggc
ccacctggggctcttggtgatcctggtctccctggactacaaggccctccaggatttgaa
ggagctccagggaagccgggccccttcgggagggctggagtgcctggacagagcctgaga
gtgggctacaccttggtgaagcacagccagtcagaacaggtgcccctgtgccccagcggg
atgagccagctctgggtgggttacagcctgctgttcgtggaggggcaagagaaagcccac
aaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgccattcatc
tactgcaacatcaatgaagtgtgccactatgcccgacggaatgataagtcctactggctc
tccaccaccgcccccatccctatgatgccggtcggccagacacagatcccccagtacatc
agccgctgctctgtgtgtgaggcgccctcgcaagccattgctgtgcacagccaggacatc
accatcccacagtgccccctgggctggcgcagtctgtggattgggtactccttcctcatg
cacacagccgccggtgcagagggcgggggccagtccctggtctctcctggatcctgccta
gaggatttccgggctactcctttcatcgaatgcagtggtgcccggggcacctgccactac
tttgccaacaaatatagtttctggctgacaacagtggaagagaggcagcagtttggggag
gagcctgtatctgagacgctgaaagctggacagctccacacccgagtcagccgctgccag
gtgtgtatgaaaagcgtgtag
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integrated database retrieval system
