KEGG   Bos mutus (wild yak): 102272760
Entry
102272760         CDS       T02919                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
bom  Bos mutus (wild yak)
Pathway
bom03420  Nucleotide excision repair
bom04115  p53 signaling pathway
bom04120  Ubiquitin mediated proteolysis
bom05161  Hepatitis B
bom05169  Epstein-Barr virus infection
bom05200  Pathways in cancer
bom05202  Transcriptional misregulation in cancer
bom05210  Colorectal cancer
bom05212  Pancreatic cancer
bom05213  Endometrial cancer
bom05214  Glioma
bom05216  Thyroid cancer
bom05217  Basal cell carcinoma
bom05218  Melanoma
bom05220  Chronic myeloid leukemia
bom05222  Small cell lung cancer
bom05223  Non-small cell lung cancer
bom05224  Breast cancer
bom05225  Hepatocellular carcinoma
bom05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102272760 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102272760 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    102272760 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102272760 (DDB2)
   05202 Transcriptional misregulation in cancer
    102272760 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    102272760 (DDB2)
   05212 Pancreatic cancer
    102272760 (DDB2)
   05225 Hepatocellular carcinoma
    102272760 (DDB2)
   05226 Gastric cancer
    102272760 (DDB2)
   05214 Glioma
    102272760 (DDB2)
   05216 Thyroid cancer
    102272760 (DDB2)
   05220 Chronic myeloid leukemia
    102272760 (DDB2)
   05217 Basal cell carcinoma
    102272760 (DDB2)
   05218 Melanoma
    102272760 (DDB2)
   05213 Endometrial cancer
    102272760 (DDB2)
   05224 Breast cancer
    102272760 (DDB2)
   05222 Small cell lung cancer
    102272760 (DDB2)
   05223 Non-small cell lung cancer
    102272760 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    102272760 (DDB2)
   05169 Epstein-Barr virus infection
    102272760 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bom04121]
    102272760 (DDB2)
   03400 DNA repair and recombination proteins [BR:bom03400]
    102272760 (DDB2)
Ubiquitin system [BR:bom04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     102272760 (DDB2)
DNA repair and recombination proteins [BR:bom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      102272760 (DDB2)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd EIF3I WD40_RFWD3 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 102272760
NCBI-ProteinID: XP_070239504
LinkDB
Position
15:complement(5028153..5048257)
AA seq 443 aa
MAPRKRPENQKTPEVVVRPKSKRNRSPRELEPEAKKLCVKGPGSSRRFDSGLWAGLASLR
VPPLCSSIVRALHQHKLGTAAWPSLQQGLQQSFLNSLASYRIFQKAAPFDRRATSLAWHP
THPSTLAVGSKGGDILLWNFGIKDKPTFIKGIGAGGSITGMKFNPLNTNQFFTSSMEGTT
RLQDFKGNTLRVFASSDTCNVWFCSLDVSVKSRVVVTGDNVGHVILLNMDGRELWNLRMH
KKKVTHVALNPCCDWLLATASVDQTVKIWDLRQVRGKSSFLHSLPHRHPVNAAHFSPDGA
QLLTTDQKSEIRVYSACQWDCPPSLIPHPHRHFQHLTPIKASWHPRYNLIVVGRYPDPNF
KSCSPHELRTIDVFDGSSGKIMYQLYDPESSGIMSVRPGPSNNKWEEAGIQPHGSKMTNY
SSHALLLLPPLPPHAHPLVSAAQ
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggctcccaggaaacgcccagaaaaccagaagacccctgaggtggttgtgcgccccaag
agcaagaggaacagaagcccccgggagctggagcccgaggccaagaagctctgtgtgaag
ggccccggttctagcagaagatttgactcaggcctttgggcggggttggctagcctgcgg
gtcccgccgctatgcagcagcatcgtcagggccctccaccagcataagctgggcacagct
gcctggccatcactacagcagggtctccagcagtcttttttgaactctctggcttcttac
cggatattccaaaaggctgccccttttgacaggagggccacatccctggcgtggcaccca
actcaccccagcaccctggctgtgggctccaaagggggagatatcttgctctggaacttt
ggcataaaggacaaacctaccttcattaaagggattggagctggagggagcatcactggg
atgaagtttaaccctctcaataccaaccagtttttcacctcctcaatggagggaacgact
aggctgcaagattttaaaggcaacactctccgagtttttgccagctcagacacctgcaac
gtctggttctgcagcttggacgtatctgtcaaaagccgagtggtggtcacgggagacaat
gtggggcacgtgatcctgctgaacatggatggcagggagctttggaatctgagaatgcac
aaaaagaaggtgacccatgtggccctgaacccgtgctgtgactggctcctggccacagcc
tccgtagatcaaacggtgaaaatctgggacctgcgccaggttagagggaaatccagcttc
ctccactcgctgccgcacaggcatcctgtcaacgcagctcacttcagtcccgatggagcc
cagctcctgactactgaccagaaaagtgagatccgggtttactctgcttgccagtgggac
tgcccgccaagcctgatcccacatcctcaccgccacttccagcacctgacgcccatcaag
gcaagctggcatcctcggtacaacctcattgtcgtgggccgatacccagatcctaatttc
aaaagttgttccccccatgaattaaggacgatcgatgtgtttgatggaagctcaggaaag
atcatgtatcagctgtatgacccagaatcttctggtatcatgtcggtgaggcctgggccc
tcaaataataaatgggaggaggcagggattcaacctcatggatcaaaaatgaccaattac
tcctcacatgcccttcttctgctacctccactccctcctcatgctcatccccttgtctct
gcagctcaatga

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