Bos mutus (wild yak): 102272992
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Entry
102272992 CDS
T02919
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
bom
Bos mutus (wild yak)
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bom03036
]
102272992 (SHOC1)
Chromosome and associated proteins [BR:
bom03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102272992 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
102272992
NCBI-ProteinID:
XP_070232178
LinkDB
All DBs
Position
8:11806557..11890588
Genome browser
AA seq
1507 aa
AA seq
DB search
MFPAFKYCAIDYLNESVVRKKLWKNTLLLRIPSCLYQDDNYPANVIDNKFRRPWTRVSAV
SIWGETDISVLDQWKASLTVDDFLEKKTVTGMVTQLNCEFDEIVPSSNPNSQTEVEEASL
YTHKEYNEFFTLVSCLEKRPSLQAQDLSIDEEIIFVNYLTAYKSQLPTLHTLLSRLKLFL
VKDPLPDFKAQIPTEAKFFRECFSLQGDVKCLVEEDFYMDKEDFCQEKLKDTVGLNEASS
TLLECELLVPISHKQEVDIPSLSELKESLNLMPEIINYADENENLSKTDLTIKHGVDLED
IKCSSIEIMAIQNQYETEYRQPEELEMPLTRLDPTNHHSSVNSLCAELQTFPSSPVCKIN
LLTAEESANKYHMLWQSESCRSSLNSFLIRVPRIEEPNNQYSLTDLKKIFSVEEEKLVVN
PVNAEWWKEARLNLTETLEPLSTYLCHNNLSSDDTKLETFLPTNVPQLEPWLEHEDCSSP
LILINEQSTNDHLSPPQKTPSPTKEVSDLHLSDEYVSVERPRKEEKPKNDLELGYGIIQN
KENKDHLELDSTVPSTESSSSSKIEKASFKHGKKWENNLDLLSDFIMLRNKYPTCTSKTE
VTDDGKDELQNEEEVSLTLQEESPIVCNNKTLEKTNQERRADNVIEIPASDSQCQAYCLL
EAAASPILEKLVCLCTLPAANWKFATVIFDQTRFLLKEQEKIISDAIHQGKNEEREMTFK
YAALLHLLVTIRDVLLTCNLDTALGYLSNAKDIYKSVFGSCLYDIWRQLEIVQFIRGKKP
EINYKIRELQCQILNWMQNEQQIKVLVIIRMDSDGEKHLLIKILNKIEGLTLIVLHSNKR
KDFLESEGVLNSTSFCVVAPNQYIGADFPWSNFSFVVEYNFVENSCWTEHCEKLNIPYMA
FKVILPDTVLKRSSLLDSFGGFLLEIQIPYMFFASEGLLNTPEILQLLESNYNITLVERC
CSESLKLFGGTEHYVVMTIDEHSTVILQDLEELNCEKASDNIIMRLMALSFQYSYCWIIL
YAKKPLNSEYHLTEKTLHHLALIYAALVSSGLKSEELDVKLIIAPGVEETALMIRQIADH
NLMTSKRDPHEWLDKSWLKVAPSKEEMYLLDFPSVTPLVAQLMLNKGPSLNWILLATLCQ
LQELLPEVPEKVLKHFCGITSLFKISPSITESPQISSPQENRDQTRNFTSQSSASGSSDS
VIQEHINYQYSDLGETVHEDTNSTSNYTSSLMELKEMPGILPSVSSYNQTSHWKESSCNP
NTVQNNSVLTNMEARNVSGNSFLNQNDSESDVFSLGLTEMNYETIISPINTQKRVTPHFI
NYQKKGTHEKKGPIKKELSAPVFSLEGSQPPLHWNFKRNVWEQQNHSFNLQSGAEQSTCD
KWYSQKDNLFINQRKYQSDELEGFICESSNAGTKKTFWKELPSVPSLDLSCASDSNVNQK
EFNSLYFYQRAGKCLGQKRHSESSSNSGDNNSLTDFTCLQPAQFKKQRLVYEKVPGRLDG
QTRLRFF
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagcattcaaatattgtgcaatagattatttgaatgagagtgtagttagaaag
aagttgtggaaaaatactttattgcttcggatcccttcatgtttatatcaagatgacaat
tatcctgcaaatgttattgataataagtttaggaggccatggacaagagtttcagctgtt
tcaatttggggagagacagatatctcagtcttggatcaatggaaagcaagtctcactgtg
gacgatttccttgagaaaaaaacagttacaggaatggtgacccagcttaactgtgaattt
gatgaaattgttccaagttcaaacccaaactcccaaaccgaagtagaggaagccagcttg
tatacccataaggaatacaatgaattctttactcttgtcagctgcttagaaaaacgccca
tcacttcaagcacaagatttgtccattgatgaagaaataatttttgtaaattatttgaca
gcctataaaagtcagctaccaactttgcacactctgttgagtaggctaaaactattttta
gtaaaggatcccttgccggatttcaaagcacagatccccacagaagctaaatttttcagg
gagtgtttctctcttcaaggagatgtaaaatgtttggtggaagaagatttttacatggat
aaagaggacttttgtcaggagaaactgaaagatacagtaggtttaaatgaagcttcatca
actttgcttgaatgtgaattgttagtacctataagccacaaacaagaagttgatattcca
tcactctcagaactgaaagagtcattaaacttaatgccagaaataataaattatgcagat
gaaaatgaaaacctttccaaaacagatcttactatcaagcatggagttgaccttgaggat
ataaaatgcagctccatagaaattatggccattcaaaatcaatatgaaacagagtacagg
caaccagaagagttagaaatgccattaactcgtctagacccaacaaaccaccattcttcg
gtgaattcattatgtgcagaacttcagacatttccatcttctcctgtttgtaaaattaat
ttgcttactgctgaagaatcagctaacaaataccatatgctatggcaatcagaaagctgc
cgaagctctctgaactcatttttgatcagagtgccaagaattgaagagcccaacaatcaa
tattcacttacagatttgaaaaagatattttctgttgaagaagaaaaacttgtggttaat
cctgtaaatgcagaatggtggaaagaagcaagactaaatctgacagaaactttggaacct
ctaagtacatatttgtgtcataataatttatcttctgatgatactaaattggagacattt
ttacctacaaatgtgcctcaattagaaccatggttagaacatgaagattgttcctctcct
cttatacttattaatgagcaatctacaaatgatcatttatcacctccacaaaagactcca
tctccaactaaagaagtatcagatttgcatctttctgatgaatatgtctctgttgaaaga
ccaagaaaagaagaaaaaccaaagaatgacctagaactaggttatggaataatccaaaat
aaagaaaataaagatcacttggaacttgacagcacagtaccatctactgaatcatcttcc
tcttcaaaaattgaaaaagcatcttttaaacatggtaaaaaatgggagaataatttggac
ctcttgagcgactttattatgctgcgaaataagtatccgacttgtacctcaaagactgaa
gtcacagacgatggaaaagatgaacttcaaaacgaagaagaagtttctttgactcttcaa
gaagaaagccctattgtttgtaataataaaaccctagagaaaacaaatcaggaaaggaga
gcagataatgtcatcgaaattccagcatcagatagccagtgccaagcatattgtctcctg
gaagcagcagcttctcctatcttagaaaaacttgtgtgcctctgtactcttcctgctgct
aactggaaatttgccactgtcatttttgaccaaacaaggttcctcttgaaagaacaagaa
aaaataataagtgatgctattcatcaaggtaaaaatgaggaaagagaaatgacattcaag
tatgctgctctcttacaccttttggtaacaattagagatgtccttttaacctgtaacttg
gacacagcattgggatatttgtcaaatgcaaaagatatctacaaaagtgtttttggttcc
tgtttgtatgacatttggcgacaactggagatagtacagtttataagggggaaaaagcct
gaaatcaactataagataagagaattgcaatgccagatactaaattggatgcaaaatgaa
cagcaaatcaaggtgctggttataataagaatggattcagatggagaaaaacatttactc
attaaaatccttaacaaaatagaaggtttgacactgattgtcttacattcaaacaaaaga
aaagactttctggaatccgaaggtgttttaaacagtacaagtttctgtgtagttgcaccc
aatcaatacattggagcagatttcccctggagtaatttctcatttgtggtggaatataat
tttgtagaaaactcttgttggactgaacattgtgaaaaattgaatattccttacatggcc
tttaaagtgattcttccagacacagttttaaagagaagcagcttgcttgatagttttggt
ggttttctcttggaaattcagattccatatatgttttttgcatctgaaggacttcttaat
actccagaaatactacagttgttagaatccaactataacatcacactagtggagagatgc
tgcagcgagtcactgaaactctttggaggtacagagcattatgtggtgatgacaattgat
gagcactctactgtaattttgcaggacctagaagaattaaactgtgagaaggcatcagac
aatatcattatgagactgatggcattatcattccagtacagctattgttggataatttta
tatgccaaaaagccattaaactcagagtaccatcttacagaaaagactcttcatcaccta
gcactgatttatgcagctttggtttcatctgggctaaaatcagaagaactggatgtaaag
cttataattgccccaggagtggaagagactgcactgatgattcgacaaattgctgaccac
aatttaatgacctcgaaaagagatcctcatgaatggttggataagtcctggcttaaagtt
gcaccgtctaaggaagaaatgtacttacttgattttccaagtgttactccattggtggct
cagctcatgttaaataaaggaccttcactgaactggatattgttagcaactctttgtcaa
cttcaggaactcctacctgaagttccagaaaaagtgttaaagcatttttgtggcatcact
tccttattcaagattagtccttccataacagaatcacctcaaatttcatcacctcaggaa
aacagggatcagactagaaactttacttctcagagttcagcttctggctcttcagattct
gtcattcaagaacatatcaattatcagtattcagacttaggagagacagtacatgaagac
accaacagcacttcaaattatacctcttcccttatggaattaaaagaaatgccaggcatt
ttaccatctgtgagttcttacaatcagaccagccattggaaagagtctagttgtaaccct
aacacggtacagaataattctgttctgactaatatggaagcaaggaatgtgtctggtaat
tcctttctgaaccagaatgattcagagtcagatgtcttttctttgggtctaacagaaatg
aattatgaaactataatatcaccaatcaacactcagaagagagtcacccctcactttata
aattatcagaaaaagggaacacatgaaaaaaaaggacctataaaaaaagaattgtcagct
cctgtcttttcacttgagggttctcaacctcctcttcattggaactttaagagaaatgta
tgggaacaacagaatcattcattcaacttacagagtggtgcagagcagagtacatgtgac
aaatggtactctcagaaagataatttattcattaatcagcgaaaatatcagtcagatgag
ttagaaggcttcatctgtgaaagttcaaatgctgggactaaaaagactttctggaaagaa
ttaccatctgtccccagtttggatttatcctgtgcttctgattctaatgtaaatcaaaaa
gaattcaacagtctttatttctaccaaagagctggaaaatgtttaggacagaaaaggcac
tctgagtcttcatctaactcaggagacaacaactcattaacagatttcacgtgcttacaa
ccagcgcaattcaaaaaacaacgtcttgtgtatgaaaaagtccctggtaggcttgacggg
caaactcgtctgaggtttttttga
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