KEGG   Bos mutus (wild yak): 102273907
Entry
102273907         CDS       T02919                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
bom  Bos mutus (wild yak)
Pathway
bom03013  Nucleocytoplasmic transport
bom03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102273907 (CASC3)
   03015 mRNA surveillance pathway
    102273907 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bom03019]
    102273907 (CASC3)
Messenger RNA biogenesis [BR:bom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102273907 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 102273907
NCBI-ProteinID: XP_005898092
LinkDB
Position
19:27207451..27229160
AA seq 703 aa
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSVGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGDDGEYSEEENSKVELKSEAN
DAANSSAKDEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRTGFRPAEAGGQHAGRSGETVKHETSYRSRHLEQTPVR
DPSPEADAQVLGSPEKEEVAPEIPNPAPDTAPPVPDRPVEKKSYSRARRTRIKAGDAGKV
AEEVPPPPEGLTPAPPVPEATPPTPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWSPGQ
PAFLQSRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcggcagcgcgcttcgcaggacaccgaggacgaagaatctggtgcc
tccggctcagacagcggcggttccccggcgcggggcggtgggagctgcagcggtagtgtt
ggaggcggcggcagcggctctctgccttcccagcgcggagggcgagctggggcccttcat
ctgcggcgggtggagagcgggggcgctaagagcgctgaggagtcggagtgtgagagtgaa
gatggcatcgagggcgatgctgttctttcggattatgaaagtgcagaagactcagaaggt
gatgacggggagtacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagatgagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcaaagtggggatggacaggaaagcacagagcctgtggagaac
aaagttggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggctcttttttgagcatgatcttcgagggcagactcaggaggaa
gaagtcagacccaagggacgtcagcgaaagctgtggaaggatgagggtcgctgggagcat
gacaagtttcgggaagatgaacaggctccaaagtcccgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgatatcaaaccccgaagaatccggaaa
cctaggtttgggagtcctccacaaagagatccaaactggattggtgagcggccaaataag
tcccatcgccaccagggtcctgggggcaccctaccacccaggacatttatcaacaggaat
gctgcgggtactggccgcatgtcggctcccaggaattactctcgatctggaggcttcaag
gaaggtcgtactggttttaggcctgcggaagctggtgggcagcatgctggccggtctggt
gagactgttaaacatgagactagttaccggtctcggcatttggagcagactcctgtaagg
gatccatctccagaagcagatgctcaagtgcttggcagtcctgagaaggaagaggtagcc
cccgagataccaaatcctgctcctgatactgcaccaccagttcctgacaggcctgttgaa
aagaaatcctattcccgggcaagaagaaccagaatcaaagctggagatgcaggcaaggtt
gcagaggaggtgccccctccacctgaagggctgaccccagcacctccagtcccagaagct
acacctcctacgcctgctaagactggaaactgggaggctccggtggattctactacaggg
ggtcttgaacaagatgtggcacaactaaatataacagaacagaactggagtccagggcag
cctgccttcctgcaatcacgggagcttcggggtatgcccaaccacatacacatgggagca
ggacctccacctcagttcaaccgaatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatcacaacggcaaagacctgtgccggagccccctgcccctcctgtgcatatc
agcatcatggaaggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtacagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctctat
cccccaccagtgtccatgtctccagggcaaccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggcaatcccagttacccttatgctccaggg
gcattgcctcccccaccacctcctcatctgtatcctaacacacaggccccatcgcaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccgcctgaggttgtaagcagg
ggttccagctaa

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