KEGG   Bos mutus (wild yak): 102273945
Entry
102273945         CDS       T02919                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
bom  Bos mutus (wild yak)
Pathway
bom03008  Ribosome biogenesis in eukaryotes
bom03013  Nucleocytoplasmic transport
bom03015  mRNA surveillance pathway
bom05014  Amyotrophic lateral sclerosis
bom05164  Influenza A
bom05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102273945 (NXF1)
   03015 mRNA surveillance pathway
    102273945 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    102273945 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102273945 (NXF1)
   05168 Herpes simplex virus 1 infection
    102273945 (NXF1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102273945 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bom03019]
    102273945 (NXF1)
   03009 Ribosome biogenesis [BR:bom03009]
    102273945 (NXF1)
Messenger RNA biogenesis [BR:bom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102273945 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     102273945 (NXF1)
Ribosome biogenesis [BR:bom03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    102273945 (NXF1)
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2 LRR_4 LRR_8 LRR_9
Other DBs
NCBI-GeneID: 102273945
NCBI-ProteinID: XP_005904913
UniProt: A0A6B0RKV3
LinkDB
Position
Un
AA seq 620 aa
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKSGEGNRRSGRGGSSVRSSRLEDDDRDVAM
SDVQDAPRVRYTPYAARPNRRGDNWNERTRIHVTLPLRRDRSAAERGGAGTSQDGTSKNW
FKITIPYGRKYDKSWLLNVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKI
LDRENRRISIIINSSSPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLV
AQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKILNLS
GNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAVRERFPKLLRLDGHELPPP
IAFDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLS
IPFTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSF
VVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNA
SADEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRS
AQAFTHLKAKGEIPEVAFMK
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggcggacgaggggaagtcatacaacgagcacgatgatcgagttagtttccctcaaaga
agaaagaaaggccgaggccctttccggtggaagtccggcgaggggaaccggaggtctgga
agagggggctccagcgttcggtcctcccgcctggaggacgacgacagagacgtagcgatg
agtgatgtccaggatgctccccgagtacgatacaccccctacgctgcacgacccaaccgt
cggggtgataactggaacgagcggactcgaattcatgttactctgcccctgcggagagat
cggtctgctgcagagaggggaggggctggcaccagccaggacgggacgtccaagaactgg
tttaagattacaatcccttacggcaggaaatacgacaagtcatggctcctgaatgtgatt
cagagcaagtgcagtgtcccttttactcccattgagtttcactatgaaaacacacgggcc
cagttttttgtggaggacgccagtacggcctctgctctgaaggctgttaactataagatt
ttggatcgggagaaccgcaggatatctatcatcatcaactcctcttctccaccccattct
gtgcagaatgaactaaagccagaacaagtagagcagctaaagctgatcatgagcaaacga
tatgatggctcccagcaagcacttgacctcaagggcctccgttcagacccagatttagtg
gctcagaacattgacgttgtcctgaaccgtagaagctgcatggcagccaccctgcgaatc
atcgaagagaacatccctgagctattgtccttgaacttgagcaacaacaagctctaccgg
ctggatgacttgtccagcattgtgcagaaagcacccaatctaaagatcctaaatctctct
ggaaatgagctgaagtctgagcgggagttggacaagatcaaagggctgaagctggaagag
ctctggcttgacggaaacaccctgtgcgacaccttccgagaccagtccacttacatcagc
gccgttcgagagcgatttccaaaactattgcgactggatggccatgagttacccccacca
attgcctttgatgttgaagcccccacaacgttaccaccttgcaagggaagctactttgga
acagagaccctgaagaatctggtcctgcacttcttgcagcagtactatgcggtttatgac
tcgggagaccggcagcggctcctggatgcctaccatgatggagcctgctgctcgctgagc
attcctttcaccccccagaaccctgcccgaagcaacttggccgagtacttcaaggatagc
aggaatgtgaagaagcttaaagaccctaccctgcggttccgactgctgaagcacacacgt
ctcaacgtggtggccttcctcaatgagttgcccaaaactcagcatgacatcaattccttt
gtggtagacataagtgcacagacaagcacattgctgtgtttctctgtcaacggagtcttc
aaagaagtggatggaaagtctcgggactccttgcgagcctttacccggacgttcgtcgct
gttcctgccagcaattcagggttgtgcatcgtcaacgatgagctgtttgtgcggaatgcc
agtgctgatgagatccagagagcctttgccatgcctgcacccacaccctcctccagccca
gtgcccaccctctccccagagcagcaggaaatgctgcaggctttctctacccagtctggc
atgaaccttgagtggtcccagaagtgcctccaggacaacaactgggactacaccaggtct
gcccaggcctttactcacctcaaggccaagggtgagatcccagaagtggcattcatgaag
tga

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