KEGG   Bos mutus (wild yak): 102274530
Entry
102274530         CDS       T02919                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
bom  Bos mutus (wild yak)
Pathway
bom03013  Nucleocytoplasmic transport
bom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102274530 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102274530 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bom03019]
    102274530 (THOC2)
   03041 Spliceosome [BR:bom03041]
    102274530 (THOC2)
Messenger RNA biogenesis [BR:bom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102274530 (THOC2)
Spliceosome [BR:bom03041]
 Complex C
  Other components
   EJC/TREX
    102274530 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102274530 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 102274530
NCBI-ProteinID: XP_070222341
LinkDB
Position
X:7248051..7366614
AA seq 1629 aa
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQSIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVSALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVCFEILSQIQKYDNLITP
VVDSLKYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAVFRKYPID
LAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYF
GQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDT
LVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKS
EKGSKQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPH
TSYEREVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRL
KLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLC
YDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRA
TGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPK
VLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA
VASVQNGPGGGPSSSSIGSVSKSDESSTEDTDKSRERSQCGVKAVNKASSATPKGNSSNG
NSGSNSSKTVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARE
TKERTPKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKEREKEPSRERDIAKEMKSK
ENVKGGEKTPVSGSLKSPVPRSDITEPEREQKRRKIDTHPSPSHSSTVKMVYFQVTAILP
KVPLGSENYASSPVISIHFLQDSLIELKESSAKLYINHTPPPLSKSKEREMDKKDLDKSR
ERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPN
EKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKK
HHKSSDKHR
NT seq 4890 nt   +upstreamnt  +downstreamnt
atggcggccgcaaccgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttacatttatgccggatcctcagtgaaaataaaagccacgatagttca
acttatagagatttccagcaagctctttatgaattatcataccacgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttagtgacatcagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgaaacaaattgtttagaagaa
aaaagcaagagagattattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaatttaatttgttaagagaagaaaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaaatgga
gagactccttcatctttatacagagttgcagccgtacttctacaatttaaccttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtagaagctaagcagatcgttagaaaacttacaatggttgtattgtcttct
gataaaattgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtggagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcagcat
gcgcagagcattatggatcagatgcctccatactatgcagcttcacataaactaatagcc
cttgctatttgcaagctgattcatataactattgagcctctctatcgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttagtgctttgcaaaataagagagcaccaaaacaa
gcagagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtccc
cacctttctcacgatcccattttattcgcaaaagtggtgcggataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagaaaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacttacaacagtcatccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatgtatgttttgagatcttgtcacaaatacagaagtatgataacttgataacacct
gtagtagattcattgaaatacctcacttcgttgaattatgacgtcttggcctattgtatc
attgaagctttagctaatccagaaaaggagaaaatgaaacatgacgacacaaccatctca
agttggcttcagagtctggctagtttctgtggtgcagtttttcgtaaatatccaattgat
cttgctggtcttcttcagtatgtggctaatcagctaaaggcaggcaaaagttttgacctg
cttatactgaaagaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgaca
atggagcaactagaagccatgactggtggagagcaactaaaagctgagggtggttatttt
ggccagataagaaacacgaaaaaatcctcccagagattaaaggatgcactattagaccat
gatcttgctcttcctctctgcttgcttatggctcagcagaggaatggggtaatctttcag
gaaggtggagagaaacatttgaaacttgtgggaaaactctatgatcagtgtcatgatacc
ctggtacagtttggtgggtttttagcatctaatctaagcacagaagattatataaagcga
gtgccttcaattgatgtgctctgtaatgaatttcacacacctcatgatgcagcatttttc
ctgtctaggccaatgtatgcacaccatatttcgtcaaagtatgacgaacttaaaaaatca
gagaagggaagtaaacagcagcataaagtccataagtacatcacatcatgtgaaatggtg
atggctcctgttcatgaagcagtggtttccttacacgtttccaaagtctgggatgacatc
agtcctcaattctatgctacattctggtcattgacaatgtatgaccttgcagttccacat
accagctatgaacgggaagtcaataaacttaaaatccagatgaaagcaattgatgacaat
caggaaatgcctccaaataaaaagaaaaaagagaaggagcgatgtactgcccttcaggac
aagcttcttgaagaagaaaagaaacagatggaacatgtacagcgagttctgcagagactg
aaactggaaaaggacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaa
tttctacagctgtgtatatttcctcgatgtattttttcagcaattgatgctgtttactgt
gctcgttttgttgaattggtacatcaacagaaaactccaaatttttccacacttctttgc
tatgatcgagttttctctgatataatttacacagtcgcaagctgtactgaaaatgaagct
agtcgatatgggagattcctttgctgcatgttagagactgtgaccaggtggcacagtgat
agagccacatatgaaaaggaatgtggaaattatccaggattccttactatattacgagca
actggatttgatggtggaaataaagctgatcaattagactatgaaaattttcgacatgtt
gtacacaaatggcattacaaactaaccaaggcctcggtacattgccttgaaacaggcgaa
tatactcacatcaggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaa
gttttgaatctgggtcaggcattggaaagaagagtgcataaaatctgccaagaggaaaaa
gagaagaggccagatctatatgcattggctatgggctactctgggcagttgaaaagtaga
aagtcatacatgatacctgaaaatgagtttcatcacaaagacccccctccgaggaatgca
gttgccagtgtacaaaatgggcctggtggtgggccttcttcatcgtcgatcggaagtgta
tctaagtcagacgaaagcagtaccgaggacactgataaatcaagggagagatctcagtgt
ggtgtgaaagctgttaataaagcttctagtgccacaccaaaagggaattcaagtaatgga
aatagtggctctaacagcagcaaaactgttaaagaaaacgacaaagaaaaaggaaaagag
aaagaaaaagagaaaaaagaaaagactccagctactactccagaggcccgagtacttggt
aaagatggtaaagaaaaaccaaaggaagaacggccaaataaagatgaaaaagcaagagag
acaaaggaaagaacacctaaatctgacaaagagaaagaaaaattcaagaaggaagaaaaa
gctaaagatgagaaattcaagaccactgtcccgaatgtagaatcaaagtcaactcaagaa
aaggaaagagagaaggagccatccagagaacgagatatagcaaaggaaatgaaatcaaag
gaaaatgttaaaggaggagagaaaacaccagtttctgggtccttgaaatcacctgttccc
cgatcagatattacagagcctgaaagggaacagaaacgtcgcaaaattgatacccatcct
tctccatcacattcctcaacagtaaagatggtttatttccaggttacagccatacttccc
aaagttcctctgggttctgagaactatgccagctcacctgtcatctccattcattttcta
caggacagtctcatcgaactcaaggagtcttcagcaaagctctacattaatcatactcct
ccaccactgtccaagagtaaggagagagaaatggacaagaaagatttggacaagtcaagg
gaaagatccagagaaagagaaaaaaaagatgaaaaggacaggaaagagcggaaaagggat
cactcaaacaatgaccgagaagtgccaccggacttaaccaagaggcggaaagaggaaaat
ggaacaatgggggtttcaaaacacaaaagtgaaagtccatgtgagtctccttatccaaat
gagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcggcgactca
tttaaatctgaaaagatggataaaatctcctctggtggcaaaaaggagtccaggcatgat
aaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaaggaagagaagaaa
catcataagtcctcggacaagcacagataa

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