Bos mutus (wild yak): 102275709
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Entry
102275709 CDS
T02919
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
bom
Bos mutus (wild yak)
Pathway
bom04512
ECM-receptor interaction
bom04514
Cell adhesion molecule (CAM) interaction
bom04820
Cytoskeleton in muscle cells
bom05144
Malaria
bom05205
Proteoglycans in cancer
bom05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102275709 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
102275709 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102275709 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
102275709 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
102275709 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
102275709 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bom04131
]
102275709 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
bom04090
]
102275709 (SDC1)
00535 Proteoglycans [BR:
bom00535
]
102275709 (SDC1)
Membrane trafficking [BR:
bom04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
102275709 (SDC1)
CD molecules [BR:
bom04090
]
Proteins
102275709 (SDC1)
Proteoglycans [BR:
bom00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
102275709 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
102275709
NCBI-ProteinID:
XP_070235266
LinkDB
All DBs
Position
11:complement(28087907..28112652)
Genome browser
AA seq
310 aa
AA seq
DB search
MRRAALWLWLCALALRLQPALLHSVAVNMPPEDQDGSGDDSDNFSGSGAGALPDITSSHT
PSTWKDLGPVMTTATAPEPTSPDAIAASTTILPTGEQPEGGRAVLLAEVEPGLTAQKEAT
HPPSETTLHPTTHSVSTARATMAPGPATSHPHRDVQPDHETSAPTGRGRMEPHRPHVEEG
GPPATEKAAEEDPSTQIPVGEGSGEQDFTFDLSGENAAGAAVEPGSRNGAPEDPEATGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPTKQEEFYA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctggctgtggctctgcgcgctggcgctgcgcctgcagccggcc
ctcctgcacagtgtggccgtaaacatgccccccgaagatcaggatggctctggggacgac
agtgacaacttctctggctcgggcgcaggtgctttgccagatatcacctcatcacacacg
ccctccacctggaaggacctggggcccgtgatgaccacagccacggctccagagcccacc
agcccagatgccatcgccgcctccaccaccatcctgccaaccggagagcagcctgagggg
ggcagggcagtgctcctggcagaggtggagcctggcctcaccgcccagaaggaggccacc
cacccacccagtgagaccacactgcacccgaccactcacagcgtgtccacagccagagcc
accatggccccaggacccgccacctcccatccgcacagggacgtgcagcccgaccacgag
acctcggctcccacaggccggggccgtatggagccgcacaggccccacgtggaggaggga
ggtcctcctgccactgagaaggcggctgaggaggacccctccacccagatcccagtggga
gagggctctggggagcaggacttcaccttcgacttgtctggggagaatgcggccggggcc
gcagtggaacctggctcacggaatggagccccggaggatcctgaggccacgggggctacg
ggggcctcacagggcctcctggatcggaaggaagtcctgggaggggtcattgctggaggc
ctcgtggggctcatctttgccgtgtgcttggtgggtttcatgctgtaccggatgaagaag
aaggacgagggcagctactccttggaggagccaaaacaagccaacggcggggcctaccag
aagcccactaagcaggaggagttctacgcctga
DBGET
integrated database retrieval system