Bos mutus (wild yak): 102279685
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Entry
102279685 CDS
T02919
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
bom
Bos mutus (wild yak)
Pathway
bom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102279685 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bom03021
]
102279685 (CPSF3)
03019 Messenger RNA biogenesis [BR:
bom03019
]
102279685 (CPSF3)
Transcription machinery [BR:
bom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102279685 (CPSF3)
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102279685 (CPSF3)
U7-dependent histone pre-mRNA processing factors
102279685 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
102279685
NCBI-ProteinID:
XP_005905573
UniProt:
L8HZ88
LinkDB
All DBs
Position
11:18842990..18876382
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgattcctgcagaggagagtgaccagctgctgatccgaccccttggagctggg
caggaagtgggaagatcatgtattattctggagttcaaggggaggaagataatgctggac
tgtgggatccatcctggcctagaaggaatggatgctcttccttatattgatttgattgac
ccagctgagattgatctcctactaattagtcatttccatttggatcactgtggagctttg
ccctggtttctacagaagacaagtttcaaaggaagaacatttatgactcatgctacaaaa
gctatttatagatggcttctttcagattatgtcaaagttagtaacatatcagcagacgac
atgctgtatactgagacagatttggaagaaagcatggacaaaattgaaaccatcaatttt
catgaagtgaaggaagttgcaggaatcaagttttggtgttatcacgccggccatgtcctg
ggagctgccatgttcatgatcgagatcgcaggcgtgaagcttttatacacaggtgatttc
tcaagacaagaagacagacacttaatggcagctgaaattcctaacattaaacctgatatt
cttatcattgaatctacttatgggacccatatccacgagaagcgagaggagcgagaggca
aggttctgtaataccgtccatgatattgtgaacagagggggccgaggcctcattcccgtc
tttgctctcggacgggcccaggaactcctcttgattttagatgagtactggcagaatcac
ccagaactccatgatattccaatatactatgcatcatctttggccaagaagtgtatggca
gtgtaccagacatatgtgaacgccatgaatgacaaaatccgcaaacagatcaacatcaat
aatccatttgttttcaaacacattagtaatctgaagagcatggatcattttgatgacatt
ggtcccagcgtggtcatggcctccccaggcatgatgcaaagtggtttatccagagagctc
tttgaaagctggtgtactgataagaggaatggcgtcatcatagccggctactgtgtagaa
ggcacgcttgccaagcatatcatgtctgaaccggaagaaatcactaccatgtccgggcag
aagttacctctgaaaatgtctgttgattacatctctttctctgcgcacacggattaccag
caaaccagtgaatttatacgtgctttgaagccgcctcacgtgatcttagtccatggagaa
cagaatgaaatggccagattgaaagcagccctgattcgagaatatgaagataatgatgaa
gttcacatagaggttcataatcctcggaatacagaggcagtgaccttgaacttcagggga
gaaaaactagccaaggtcatgggatttttagcagacaaaaaaccagaacagggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacttggccatgagcactgtaaaacagacccaagccattccatatact
ggtccttttaatttgctctattaccagctacagaaattgacaggtgatgtggaagaatta
gaaattcaagaaaagcctgctttgaaagtgtttaaaaatattactgtaatacaggaacca
ggaatggtggtattagaatggttggcaaatccttccaatgatatgtatgcagatacagtc
acaaccgtgatactagaagttcagtcaaacccaaaaataaggaaaggtgcagtacagaag
gtttctaaaaaattagaaatgcacgtttacagcaagaggctggagatcatgcttcaggac
atatttggagaagactgtgttagtgtaaaagatggttctattcttagtgtcacagtggat
ggaaaaactgctaacataaatttggagacacggactgtagaatgtgaagaaggcagtgaa
gatgacgagtccctccgagaaatggtggaactggcggcccagagactgtacgaggccctc
acacccgtccactga
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