KEGG   Bos mutus (wild yak): 102280806
Entry
102280806         CDS       T02919                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bom  Bos mutus (wild yak)
Pathway
bom03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102280806 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bom03021]
    102280806 (TAF5L)
   03036 Chromosome and associated proteins [BR:bom03036]
    102280806 (TAF5L)
Transcription machinery [BR:bom03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102280806 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     102280806 (TAF5L)
Chromosome and associated proteins [BR:bom03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     102280806 (TAF5L)
    STAGA complex
     102280806 (TAF5L)
    TFTC complex
     102280806 (TAF5L)
    SAGA complex
     102280806 (TAF5L)
    SLIK complex
     102280806 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_SCAP Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Tricorn_2nd RMC1_N Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN eIF2A Ge1_WD40 WD_LRWD1 Nbas_N Beta-prop_IP5PC_F Mala_s_1-like vATP-synt_AC39
Other DBs
NCBI-GeneID: 102280806
NCBI-ProteinID: XP_070220709
LinkDB
Position
28:complement(43307771..43341604)
AA seq 605 aa
MNCSSPGSSVHGILQVMKRVRTEQIQMAVSCYLKRRQYGDADGPLKQGLRLSQSTEEMAA
SLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLH
LTLIQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYV
VRLQEDSYNYLLRYLQSDNNTALCRILAWHIHLDVQPAKRTDYQLYTSGGSFRGEGGGLE
PADMPAPILQNEAALELLQESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSKLLA
AGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDFLEEEDDEDDNLGTEMKVLRGHCGP
VYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASH
DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLF
TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL
VASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQ
ENQEH
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgaactgtagctcaccaggctcctctgtccatggaattctccaggtcatgaaacgggtc
cgcacggagcagatccagatggccgtgtcctgctacctcaaacgccggcagtacggggat
gcagacggtccgctgaagcaaggcctgcggctatcgcagagcactgaggagatggccgcc
agcctcacagtccaatcagaatctggttgtgccaacatagtgtccgcagccccttgccag
gcagagccccagcaatatgaagtacagttcggacggctgcggaattttctcaccgattct
gactcccagcacagccatgaagtgatgcctctcctctaccctctctttgtctacctccat
ctcaccctgatccagaacagtccgaagagcacagtggaaagcttttacagccgcttccat
ggaatgtttctgcagaatgccagccagaaggatgttatcgagcagctccagaccactcag
accatccaggacatcctgtctaacttccggctgcgagccttcctggacaacaaatacgtg
gttcgtctgcaggaagacagctacaactaccttctccgctacctccagagtgacaacaac
actgcgctgtgcaggatcctcgcctggcacatccatctggacgtgcagcccgccaagagg
acagactaccagctctacaccagtggtggctccttccgaggcgagggtggcggcctggag
cccgccgacatgccagcgcccatcctgcagaatgaggccgcgctggagctcctgcaggag
agcatcaagcgcgtcaaggacggccccccctccctcaccaccatctacttctatgccttc
tacaacacagagcagctgctgaacactgcagaggtctccccggacagcaagctgctcgca
gcaggctttgacaactcctgtataaaactgtggagtctgcgttccaagaagttaaagtcc
gaaccccatcaagtagatgtgtcccgcatccacttggcttgtgatttcctagaggaggag
gatgacgaggacgacaacttaggcacagagatgaaggtcctgcggggacactgtgggcca
gtgtacagcaccaggttcctcgcggacagctcggggctgctctcctgctctgaagacatg
tccatcaggtactgggacctgggcagcttcaccaacaccgtgctgtaccagggccacgcc
taccccgtgtgggacctggacatcagcccgcacagcctgtacttcgccagcgcgtcccac
gaccgcacggcccggctgtggtcatttgatcggacgtacccgctgcgaatctacgccggg
cacctggcagacgtggactgcgtcaagttccaccccaattcaaactacttagccacgggc
tcaaccgacaagacggtgcggctgtggagcactcagcaggggaactccgtgaggctcttc
acgggccaccgcggccctgtgctctccctggctttttcccccaacggtaagtacctggca
tcagcaggcgaggaccagcggctgaagctgtgggacttggcatccgggaccctctacaaa
gagctgcggggccacacggacaacatcaccagcctcaccttcagcccagacagcagcctg
gtcgcgtcagcgtccatggacaactccgtgcgtgtctgggacatcagaagctcacactgt
agcacacctgccgatggctcatccagcgagctcgtgggcgtctacaccggccagatgagc
aatgtgctgagcgtgcagttcatggcctgcaacctcctgctggtgactggaatcacacaa
gaaaatcaggaacattga

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