Bos mutus (wild yak): 102280989
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Entry
102280989 CDS
T02919
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
bom
Bos mutus (wild yak)
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bom04040
]
102280989 (SCN11A)
Ion channels [BR:
bom04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102280989 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
102280989
NCBI-ProteinID:
XP_070215710
LinkDB
All DBs
Position
22:complement(12458476..12599911)
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AA seq
1785 aa
AA seq
DB search
MDDRCYPVIFPDGRNFRPFTPDSLAAIKKRIAIQKEKNKSKDRKAAEREPRPQLDLKVSR
KLPKLYGDIPRDLIAKPLEDLDPFYHNHKTFMVLNKKRTIYRFSAKRALFILGPFNSIRS
LAIRISVHSLFSMFIICTVIINCVFMALAHQKSSIDVKTDHAEYVFLGIYLFEALVKILA
RGFILDEFSFLRDPWNWLDSIVIATAFVSYSPYINDSSFSLSSLRTFRVFRALKAISVIS
GLKVIVGALLHSVKKLVDVMILALFCLSIFALVGQQLFMGNLTYKCVSNSCKHHYQDYYQ
DYCFKKEESTEFKMCGMWMGNRACPEQYECRDSHKNPDYNYTNFDNFGWSFLAMFRLMTQ
DSWEKLYRQTVRTSGLISVLFFVVVIFLGSFYLVNLTLAVVTMTYEEQNKNVAAETEAKE
KMFQEAQQLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGSKKRKSFFLRKSGKDQ
IPGSDSDEDSSKKPHLLEQTKRLSQNLSVDHCDEHGDSFQRQRALSAVSILTITMQEQEK
SQEPCLPCGENLASRYLVWDCSPWWLDIKKVLRTVMTDPFTELAITICIIINTVFLAMEH
YKMDQNFENILYTGNLVFTGIFMAEMCLKIIALDPYHYFRRGWNIFDSVVALLSLADVIL
NHIVSGKSWISFRSLRVLRVFKLAKSWPTLSTLIKIIGHSVGALGNLTVVLAIVVFIFSV
VGMQLFGSKFNNRKNNLKSCDPEVLCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQE
ANPTLCVIVFLSIMVIGKLVVLNLFIALLLNSFSNEERNGHLEGKVKKTKIQIALDRFRR
AFCFVIHTLEHFFRKHCRKRHLSKQKEVTEDPGGKIKDIIPLVTGMRKGPEIWEEFGVLT
SVPMALHDRTWLAPLAEEEDDAEPPGEDKAQAVTQPEAGKQCQASEVHQKSKGLTSPGIQ
SVEIDLFSGDDPPMSIQNLRKKSDAASVLSECSTIGPQDPFMRVLEMIPKKEPERCLPKG
LNCCSLCHTVDKRKSSWITWWSLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDINLDK
QPKIQELLKCTDTIFTYIFILEMGLKWVAFGFRKYFTSVWCWLDFVIVIVSVTSLIDLMG
LKSFRILRALRPLRALSQFEGMKVVVYALIGAIPAILNVLLVCLIFWLIFCILGVSLFSG
RFGRCVNATDVKSVIDYNIVANRNQCESGHFYWDTPDVNFDNVLMAYLALLQVATFKGWM
DIMYAAVDSTEEGQQPQFEARSSMYLYFVVFIIFGSFFTLNLFTGVIIDNFNQQQKKISG
QDVFLTEEQKKYYNAMKKLGSKKPQRPIPRPQNKCQGFVFDLVTHQVFDIIIIILILLNM
LSMMAETHKQSETMKHLLECFNLAFVVIFAIECFIKIFALRQYYFANGWNLFDCVIVLLS
IVSSVVSALKTEAQIPFPPTLFRMVRLVRIGRILRLVRAARRIRTLLFALMMSLPSLFNI
GLLLFLVMFIYAIFGMNSFRKVKEESGIDDIFNFQTFTSSMLCLFQITTTAGWDALLSPM
LKSNKSCDPKTESCHLSTIAIIYFVTYIIISSLIVVNMYIAVILENFNVATEESEDPLGE
DDFEMFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGERL
HCLDILFAFTTRVLGESSGLDSMKAAIEEKFMEANPFKKLYEPIVTTTKRNEEERCAAAV
IQKAFRKYMLKTRCTLKDRPHSTLQTLSNGDLPSSGVAEGKVHYD
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccagtgatctttccagatgggaggaatttccgccccttcact
cctgactctttggctgcaatcaagaagcggatcgccatccaaaaggagaaaaataagtcc
aaagatcggaaagcagcagaacgcgagcctcgacctcaacttgacctaaaggtctccaga
aagttgcccaagctttatggtgacattccccgtgacctgatagcaaagcccctagaagac
ttggacccattctaccacaatcataagacatttatggtgttgaacaaaaagagaacaatc
taccgctttagcgccaaacgtgccttgttcattttggggcctttcaattcaatcagaagt
ttggccattagaatctcagtccattcattgttcagcatgttcatcatctgtactgtcatc
atcaactgcgtgttcatggccttggctcatcagaagagcagcattgacgtgaaaactgac
catgctgagtatgtcttccttgggatttatttatttgaagcattagttaaaatattggca
agaggttttattctggatgagttttctttcctgcgagatccgtggaactggctggactcc
attgtcattgcaacagcatttgtatcatattctccatatatcaatgacagcagcttcagt
ctgtcatccctgcgtaccttccgagtattcagagctttgaaagcaatttcagtaatttca
ggtttgaaggtcattgttggggccttgctgcactctgtgaagaagcttgtcgatgtgatg
atcctggctctcttttgcctcagcatcttcgccctggtaggtcagcagctcttcatggga
aatctgacgtacaaatgtgtcagtaattcctgtaaacatcactatcaagattactatcaa
gactattgctttaaaaaggaagagtccactgaattcaaaatgtgtggcatgtggatgggc
aacagggcttgtcctgaacaatatgaatgcagagatagccacaaaaatcctgactataac
tacacaaattttgacaactttggctggtcttttcttgccatgttccggcttatgacccaa
gattcctgggagaagctttatcgacagaccgtgcgtacctcagggctcatctcggtcctc
ttctttgtggtggtcatcttcctgggctctttctacttggttaacttaaccctggctgtt
gtcaccatgacttatgaggaacagaacaagaatgtagctgctgaaacagaagccaaggag
aagatgtttcaggaagcccagcagctgttgaaggaggagaaggaggctctggttgccatg
ggaattgacagaagttcacttaattcccttgaagcatcatctttttccccaaagaagaga
aagctatttggtagtaagaaaagaaaatccttctttttaagaaagtctgggaaagaccag
attccaggatcagattctgatgaagattcttcaaaaaagccacacctccttgagcaaacc
aaacgactgtcccagaatctgtcagtggaccactgtgatgagcacggagactccttccaa
aggcagagagcgctgagtgctgtcagcatccttactattaccatgcaggaacaagaaaaa
tcacaggagccttgcctcccatgtggggaaaatctggcatccagatacctcgtgtgggac
tgtagcccctggtggctagacattaagaaggtcctgagaaccgtgatgactgatcctttt
actgaactggccatcaccatctgcatcataatcaacactgtcttcttggccatggagcat
tacaaaatggaccagaattttgagaatatattgtacacagggaacttggttttcactggc
attttcatggctgaaatgtgcctaaaaatcattgcgctggatccctaccactactttcgt
cgaggatggaacatttttgacagcgttgttgctcttctgagtttggcagatgtgatatta
aaccatatagtttcaggaaaaagttggatatcatttcgttccttaagagtgctgagggtc
ttcaagttagccaaatcctggccaactttaagcacactgattaagatcattggccattct
gttggagcccttggaaacctgactgtggtcttggccattgtggtctttattttctcagta
gttggcatgcagctttttggctctaaattcaataacagaaagaataatttaaagtcctgt
gaccctgaagtcctgtgtttacggcgctggcacatgggggatttctaccactcctttttg
gtggtgttccgcatcctctgtggcgaatggattgaaaacatgtgggaatgcatgcaagaa
gctaacccaacgctgtgcgttattgtgtttctgtcgatcatggtgattggaaaacttgtg
gtactcaacctcttcattgccttgctactcaattccttcagcaatgaggagagaaatgga
cacttggagggaaaagtcaagaaaaccaaaatccagatagccctggatcggttccgccgg
gctttttgttttgtaatacatactcttgagcattttttcaggaagcattgcaggaagcga
catttatcaaagcaaaaagaggtgacagaagaccctggtggaaagatcaaagatatcatt
cccctggtcacagggatgagaaagggcccagagatctgggaggagtttggcgtactaact
tctgtaccaatggccttgcatgatcggacttggttggccccacttgcagaggaagaagat
gatgctgaaccccctggtgaagataaggcacaggctgtcacacaacctgaggctggaaaa
cagtgtcaggccagcgaagtccatcagaagagcaagggtctcactagtccaggaattcag
agtgtggaaattgatctgttctctggagatgatcctcctatgtcaatacagaatcttcgg
aagaagtctgatgctgcgagtgtgctctcagaatgtagcaccattggtccacaggatccc
tttatgcgggtacttgaaatgattcccaaaaaggaaccagagaggtgtttgcccaaaggc
ctgaattgctgctctctatgccatactgtggacaagagaaagtcctcctggatcacttgg
tggagcctgcgaaaaacctgctaccaaatagtgaaacacagctggtttgagagctttatt
atctttgtgattctgctgagcagtggggcactggtatttgaagatattaaccttgataaa
caacccaaaatccaagaattacttaaatgtactgacactattttcacatacatttttatc
ttggagatgggtctgaaatgggtggcctttggatttaggaaatatttcacaagtgtctgg
tgctggctcgacttcgtcattgtgattgtctctgtgacaagtctcatcgacttaatgggc
ttgaagtccttccggattcttcgagcactgaggcccctgcgagcactgtcccagtttgaa
ggaatgaaggtggtagtttatgctctcataggtgccatacctgctattctgaatgttttg
cttgtctgcctcattttctggctcatattttgtatcctgggagtaagtctgttttctgga
agatttggaagatgtgttaatgcaacagatgtaaaatcagttatagattataacattgtt
gcaaaccggaatcaatgtgaaagtggacatttctattgggacaccccggatgtcaacttt
gacaacgtgttaatggcttaccttgcactactgcaagtggcaacatttaagggctggatg
gatattatgtatgcagctgttgattccacagaggaaggacaacagccacagtttgaggca
cgttcttccatgtacctttacttcgtagtttttatcatctttggctcattcttcactctg
aatctctttactggtgttattattgacaacttcaaccaacagcagaaaaagataagtggc
caagacgtctttctgacagaagaacagaagaaatactataatgcaatgaaaaaattagga
tccaaaaaacctcaaaggcccattccaaggcctcagaacaaatgccaaggctttgtgttt
gacctcgtcacacaccaggtctttgacatcattatcatcatcctcattctcctcaacatg
cttagcatgatggctgaaacacataagcagtcggagaccatgaaacatttacttgagtgt
ttcaacttggcctttgtggtcatctttgcaattgagtgtttcatcaaaatctttgctttg
aggcaatactacttcgccaatggctggaatttatttgattgtgtgatcgtgctcctttct
attgttagttccgtggtttctgccttgaaaaccgaggcccagattcctttccctccaaca
ctgttcagaatggttcgcttggttcggattggccgaatcctgagacttgttcgagcagca
cgaagaatcagaactctgctttttgctctgatgatgtccctgccctctctatttaatatt
ggtcttctcctctttctggttatgtttatttatgccatttttggtatgaactcttttcga
aaagtgaaggaagagtctggaatcgatgacatcttcaacttccaaacttttacaagcagc
atgctctgcctcttccagataaccacgacagcaggttgggatgccctcctcagccccatg
ttgaaatcaaacaagtcctgtgaccccaagacagagagctgccacctctctaccatagcc
ataatctacttcgtcacttatatcatcatctcctctctcattgtggtcaacatgtatatt
gctgtgattttagaaaacttcaatgtagccactgaagaaagtgaggaccctttgggtgaa
gatgactttgaaatgttctacgaagtctgggaaaagtttgacccagaagcaacacaattt
atcaaatattctgccctttctgactttgctgatgcccttcctgagcctctgcgtgtggca
aagccaaataaataccaatttttagtcatggacttgccaatggtgagtggagagcgtctc
cattgcttggatattctcttcgctttcaccacgagagtacttggtgagtccagtggcctg
gatagcatgaaagcagcaatagaagagaagttcatggaggccaaccctttcaagaagtta
tatgaacccatagtcaccaccaccaaaaggaatgaagaggaaagatgtgctgctgctgtt
attcaaaaggcctttcgaaagtacatgctgaagaccaggtgtaccttgaaagacaggcct
cattcaaccctccagacactctccaatggagacttacccagctctggggtggccgagggc
aaggtccattatgactga
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integrated database retrieval system
