Bos mutus (wild yak): 102281109
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Entry
102281109 CDS
T02919
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X4
KO
K25392
girdin
Organism
bom
Bos mutus (wild yak)
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bom03037
]
102281109 (CCDC88A)
Cilium and associated proteins [BR:
bom03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102281109 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
102281109
NCBI-ProteinID:
XP_005889530
LinkDB
All DBs
Position
11:68622512..68741410
Genome browser
AA seq
1869 aa
AA seq
DB search
MENEVFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE
SQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEEIEPLLKNMVLHLKRLIDERDEHSETIVELSEERDGLHFLPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAVRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR
STMDSAEGTTSKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKTEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRSVESLKCASMKM
AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ
QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEIGIYKESCIRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDRYKLLESKL
ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSSP
PAAGEDKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQ
ILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENESV
IKEREDLKSLYDSLVKDHEKLELLHERQASEYETLIAKHGTLKSAHKNLEVEHKDLEDRY
NQLLKQKGQLEDLEKTLKVEQEKMLLKNKNHETVAAEFKKLCGENDRLNHTYNQLLKETE
VLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEE
ENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYK
FYDPSPPRRRGNWITLKMRKLIKSKKDVNRERQKSLTLTPTRSDSSEGFLQLPHQDSQDS
SSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMVLA
GGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVNNKDTTS
FEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNIQSRPPSH
SSGEFSLLHEHEAWSSSGSSPVQYLKRQTRSSPALQHRTQESRAHHKTKTGSPGSEVVTL
QQFLEESNKLTSMQLKPSSQENLLDEVMKSLSVSSDFLGKNKPVSCGLARSVSGKTPGDF
HDRRTTKPEQFVRSGPQKAEDACFMSSSGKPTRGAQGKIKLIKETSLSRQSKDSNPYATL
PRASSVISTAEGTTRRTSIHDFLTKDSRLPMSVDSPPATADSSITATSNVDKVQENRNSK
SRSREQQSS
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaggtttttactccccttctggagcagttcatgaccagccccttggtcact
tgggttaaaacgtttggacctctggctgcaggaaatgggaccaacctggatgaatatgtg
gctttggtggatggggtattcttgaaccaagtcatgcttcaaattaatcctaaatcagag
agtcagagagtaaataaaaaagtcaacaatgatgcttcacttagaattcataatctgtcc
attttggtgagacagataaaattttattaccaggagactttgcagcagttgatcatgatg
tcattgccaaatgtcttaatcattggcaaaaatcccttttctgaacaaggcacagaagaa
gttaaaaaattgcttttgcttttactgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacgaaagcagcagttgccgcacatatt
caagaggtaacccataatcaggaaaatgtgtttgatctacaatggatggaagtgactgat
atgtctcaggaggaaatagaaccactcttgaaaaatatggtattgcatctaaaaaggctt
atagatgagagagatgaacattcagagactattgtagagctctctgaagagcgggatggt
cttcattttctaccccacgcctcttcatctgcacagtcaccttgtggttctccaggcatg
aagcgaacggaaagtcggcagcatctgtcagtggagctggcagatgctaaggccaagata
agaaggcttaggcaggaattggaggaaaagactgaacaattgttggactgtaaacaagaa
ctagagcaaatggaaatagagctaaaaaggctgcagcaagagaacatgaatttgctttcc
gatgctcgttctgcaagaatgtatcgagatgaattagatgcacttcgggagaaggccgtc
agagttgataagcttgaaagtgaagtcagcagatacaaagagagactacatgatattgaa
ttttataaggcaagagttgaggaattaaaagaagacaatcaagttttattggaaacaaaa
accatgttggaagaccaattagaaggaactcgagctcgttctgataaattgcatgaatta
gaaaaagagaatttacaactgaaagctaaactgcatgatatggaaatggaacgtgatatg
gatagaaaaaagattgaagaactaatggaagaaaatatgactttggaaatggcacagaag
caaagtatggacgaatcattacatcttggctgggaactggaacaaatatctagaactagt
gaactttctgaagcaccacaaaaatccttgggccatgaggtgaatgaattgacatcaagt
agattgttgaagttggagatggaaaatcagagtttgacaaaaactgtagaagagcttcgg
agtactatggattctgctgaaggcaccacctccaaaatcctgaaaattgaaaaagaaaat
caaagactaagtaagaaggttgaaatccttgaaaatgagattattcaagaaaagcaaagt
cttcagaattgtcagaatttaagcaaggatctaatgaaggaaaaagctcagcttgaaaaa
acgattgaaacacttcgagaaaattcagagagacagattaaaatattagaacaggaaaat
gaacatctgaatcaaactgtgtcctccttaaggcagcgctcccagataagtgctgaagca
agggtgaaagacattgaaaaagaaaacaaaattctccatgaatctatcaaagaaacaagt
agcaagctaagcaagactgaatttgaaaaaaggcaaatcagaaaagaattggaacattat
aaagaaaaaggagaaagagcagaagaacttgaaaatgagttgcatcatcttgaaaaagaa
aatgaactgttacagaaaaagataaccaatttaaaaattacttgtgaaaaaattgaggcc
ttagaacaagaaaattcagagctagaaagagaaaataggaagtttaaaaaaacactggat
agctttaaaaacctcacttttcagttggaatccctggaaaaagagaattcccagcttgat
gaggaaaacttagaacttcgaaggagtgtggaatctttgaagtgtgcaagcatgaagatg
gctcagctacaactagagaataaagaactggaaagtgaaaaagaacaacttaagaaaggt
ttagagctcatgaaagcatctttcaagaaaacagaacgcttagaagttagttatcagggt
ttagatacagaaaatcaaaggctacagaaagctcttgaaaacagcaataaaaaaatccaa
caattggaaagtgagctacaggacttagagatggaaaatcaaacattgcagaaaaaccta
gaagagttaaaaatatctagcaaaagactagaacagctggaaaaagaaaataaatcatta
gagcaagagacttctcaactggaaaaggataaaaaacaactggagaaggaaaataagaga
ctccggcaacaagcagaaataaaagataccacattagaagaaaataatgtgaaaattgga
aatttggaaaaagaaaacaaaacccttttcaaagagattggtatttataaagaatcctgc
attcgtctgaaagaattagagaaagaaaataaagagcttgtgaaaagagcaactattgat
ataaaaactttggttacattacgagaggatttggtgagtgaaaaattgaagactcaacaa
atgaacaatgatcttgaaaaattaactcatgagcttgagaagatagggttaaataaagag
cgactcttacatgatgagcaaagtactgatgaccgatacaaacttctggaatcaaaatta
gaatccactctaaagaagtctcttgaaataaaagaagaaaaaattgctgctttagaagct
cgactagaagagtccacaaattacaaccagcagttgcgccaagaactaaaaacagtgaaa
aagaattatgaggctctcaaacagagacaggatgaggaaagaatggttcagagctctcct
ccagctgctggtgaagacaagtgggagcgagaaagtcaagaaacaactagagagcttctg
aaagttaaagacagattaattgaagttgaaagaaataatgctacactgcaagcagagaag
caagcattgaaaactcaactgaaacaacttgaaacacagaacaataatttgcaggctcag
attcttgcacttcagaggcagacagtatcattacaggagcagaataccactcttcaaaca
cagaacgccaagcttcaggttgaaaattccacccttaattcccaaagtacctcacttatg
aaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaatctgta
atcaaagagcgagaagatctgaaatctctctatgattctctggtcaaagatcatgaaaag
ctggaactcctacatgaacggcaggcttcagaatatgagactctgattgctaaacatgga
actctaaagtctgcccacaaaaatcttgaggtggaacataaagaccttgaagatcgttac
aatcagttactaaaacagaaaggacagttggaagatttggaaaaaacactgaaagtagaa
caagaaaaaatgctgcttaaaaacaaaaaccatgagactgtagctgcagaattcaagaag
ctttgtggtgaaaatgataggttgaatcatacatataatcagcttttaaaagagactgaa
gttttacaaactgaccataaaaacttgaaaagtcttctaaataattcgaaactggaacaa
acaagattagaagcggaattttcaaagttaaaggaacagtaccaacaattggacatcaca
tccaccaagctaaataaccagtgtgagttgctaagccaacttaaaggaaatttagaagaa
gaaaatcgacatctactagatcaaattcagacgttaatgctacagaacagaacactattg
gagcagaatatggaaagcaaggatcttttccatgttgaacaaagacagtacattgataag
ttaaatgaattaagacgacaaaaggagaaattagaagagaaaattatggatcaatacaaa
ttttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatgagaaaa
ttgataaagtctaagaaagacgttaatcgggaacgacagaaatcactaactttaacacca
acccgctcagactccagtgaaggatttcttcaactcccccatcaagatagtcaagatagt
tcttcagtaggttcaaactctttagaagatggccaaactttggggaccaagaaaagcagc
atggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagacaaaatg
aaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtcctagca
ggaggacagtggacaggtagtactgagaatttggaggttcctgatgatatttcaacgggt
aaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttttcaact
gtcaactcttctacaggcttcagatccaagcagttggttaataataaagatactacatcc
tttgaagacgtaagtccacaaggtattagtgatgattctagtacgggatcaagagttcat
gcttcgagaccagccagccttgatagtggcagaacatccactagcaatagcaataataat
gcttcactccatgaagtcaaagcaggtgcagttaatatccagagcaggccaccaagccac
agcagtggggaattcagcctgcttcatgagcacgaggcgtggtccagcagcggtagcagt
ccagtccagtacttgaaaagacagaccagatcaagcccagcgctccagcacagaactcaa
gagagtcgggcacatcataagaccaaaactggttcccctggaagtgaagttgttactcta
caacagtttttggaagaaagcaacaagcttacctcaatgcagctaaagccctcaagtcaa
gagaatcttttagatgaagtaatgaaaagtttgtctgtctcttctgactttttgggaaaa
aacaaaccagttagctgtggtctggccaggtcagtaagtggaaaaactccaggagacttc
catgatagacggacaactaagcctgaacagtttgtgagatctggtcctcagaaggctgaa
gatgcctgtttcatgagttcttcaggaaagcctacacgaggcgctcaaggaaagataaaa
ttaataaaagaaacttctctgtcacgacaatcaaaagatagtaatccctatgccacttta
cctcgtgcaagcagtgttatctctactgccgaaggaactactcgaaggacaagcatccat
gactttttgaccaaggacagtagactacctatgtcagttgattcaccaccagctactgct
gatagcagcatcactgcgacatctaatgtggacaaagtacaagaaaacagaaattcaaaa
agcaggtctagggaacaacaaagctcctaa
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integrated database retrieval system