Bos mutus (wild yak): 102282188
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Entry
102282188 CDS
T02919
Symbol
SMG5
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5
KO
K11125
protein SMG5
Organism
bom
Bos mutus (wild yak)
Pathway
bom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102282188 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bom03019
]
102282188 (SMG5)
03032 DNA replication proteins [BR:
bom03032
]
102282188 (SMG5)
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102282188 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
102282188 (SMG5)
DNA replication proteins [BR:
bom03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
102282188 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
102282188
NCBI-ProteinID:
XP_070223441
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All DBs
Position
3:complement(20201804..20229514)
Genome browser
AA seq
1016 aa
AA seq
DB search
MSQGPPTGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGD
LSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQP
KSSSVDSELTSLCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYESGYAFLPDLLIFQMVI
ICLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTDE
PESREPLEKEEEPGPEPPPVVPPEGEVRKSRKFSRLSCLRRRRHPPKAGDDSDLSEGFDS
DSSHDSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDMEDEDGTRSPALE
PSRARSEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPTTEAPV
SATLRRCVNGDVDKPSEPASEEGSESEGSESSGRSFRNERSIQEKLQVLMAEGLLPAVKV
FLDWLRTNPDLIVVCAQSSQSLWNRLSVLLNLLPAAGELQESGLALCAEVQELLEGCELP
DLPSSLLLPEDTALRNLPPLRAAHRRFSFDTARLLLSTLEETVVRICCIRSFGHFVARLQ
GSILQFNAEVGIFVSIAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQL
EGSLQQPKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPRTVIDGLDLLKKEHP
GARDGIRYLEAEFKKGNRYIRCQREAGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQG
AGEEDPSGMVTIITGLPLDNPSTLSGPMQAALQAAAHASVDIKNVLDFYKQWKEIG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggcccccccacaggggagagcagcgagcctgaagcaaaggtcctccacact
aagcggctttaccgggctgtggtggaggctgtgcatcgacttgacctcatcctttgcaac
aaaaccgcttatcaagaagtgttcaaaccggagaacattagcctgaggaacaagctgcgt
gagctctgcgtcaagcttatgttcctgcacccggtggactatgggaggaaggctgaggag
ctactgtggagaaaggtatactacgaagttatccagcttatcaagactaacaaaaagcat
atccacagccggagtaccttggaatgtgcctacaggacacacctggttgctggtattggc
ttctaccagcatctccttctctatatccagtctcactaccagctggaactgcaatgctgc
atcgactggacccatgtcaccgaccccctcataggatgtaagaagccagtgtctgcctca
gggaaggagatggattgggcacagatggcatgccaccgatgtctggtgtacctgggggat
ttgtcacggtatcagaatgaactagctggcgtagacactgagctgctagctgagagattt
tactaccaagccctgtcagtagctcctcagattggaatgcccttcaaccagctgggcacc
cttgcaggcagcaagtactataatgtggaagccatgtactgctacctgcgctgcattcag
tcggaagtgtcctttgagggggcctatggaaacctcaagcggctgtatgacaaggcagca
aaaatgtaccaccagctgaagaagtgtgagactcggaaactctctcccagcaagaagcga
tgtaaagacattaagaggttgctggtgaactttatgtatctgcaaagcctcctgcagccc
aaaagcagctccgtggactcagagctgacatcactttgccagtcagtcctggaggacttc
aacctctgtctcttctacctgccctcctcacccaacctcagcctggccagtgaggatgag
gaggagtatgagagtggatatgctttcctcccggatcttctcatctttcaaatggtcatc
atctgccttatgggggtgcacagcttgaagagagcaggatccaagcagtacagtgcagcc
attgccttcaccctggccctcttctcccacctcgtcaatcacgtcaacatccggctgcaa
gctgagctggaagagggcgagaatcccgtcccggcgttccagagcgatggcacagatgaa
ccggagtccagggaacccttggagaaggaggaggagccggggcctgagcctcctcctgta
gtacctccagagggtgaggtcagaaagagtcggaagttctcccgcctctcctgcctccgc
cgccgccgccacccacccaaagcaggtgatgacagtgacctgagtgaaggctttgactcg
gactcaagccatgactcggcccgggccagtgagggctcggacagtggctccgacaagagt
cttgaaggtgggggaacagcttttgacgctgagacagattcagaaatgaacagtcaagag
tcccgatcagacctggaagatatggaggatgaggacgggacacggtccccagccctggag
ccatctcgggccaggtcagaggctcctgaatccctcaatgggcctctgggccccagcgag
gccagcattgccagcaatctacaagccatgtccacccagatgttccagaccaaacgctgc
ttccgactggcccccaccttcagcaacctgctcctccagcccaccactgaagcacccgtc
tcggccaccctcaggcgctgtgtcaatggagatgtggacaagccttcagagccagcctct
gaagagggctcggagtcggagggaagcgagtccagtgggcgctcctttcggaacgagcgg
agcatccaggagaagctgcaggtcttgatggccgaaggcctgctccctgctgtgaaagtc
ttcctggactggctgcggaccaaccccgacctcatcgttgtgtgtgcgcagagctctcaa
agtctgtggaaccgcctgtctgtgttgttgaacctgttgccagctgctggcgaactccaa
gaatctggcctggccctgtgtgctgaggtccaggagctgcttgaaggctgtgaactgcct
gacctcccatctagcctgctgctcccagaggacacggcccttcgcaacctgcctcccctc
cgggcggcccacagacgctttagctttgatacagctcggctcttgctcagcaccttagag
gagacagtcgtgcggatctgctgcatacgcagctttggccacttcgttgcccgcctgcaa
ggcagcatcctgcagttcaacgcagaggtcggcatctttgtcagcatcgcccagtctgag
caggagagcctgctgcagcaggcccaggcccagttccgcatggcacaggaggaagctcgg
cggaacaggctgatgagagacatggcccagctacgacttcagcttgaggtctctcagctg
gaagggagcctgcagcagcccaaggcacagtcagcaatgtctccctacctcgtccccgac
acccaggccctctgccaccacctccctgtcatccgccagctggccaccagtggccgcttc
atcgtcatcatcccaaggacagtgatcgatggcctggatttgctgaagaaggaacaccca
ggggcccgggatgggatccgatatctggaggcagagtttaaaaaagggaacaggtacatt
cgctgccagagagaggcggggaagagctttgagcggcataagctgaagaggcaggatgcc
gatgcctggacgctctataagatcctggacagctgcaaacagctgactctggcccaggga
gcaggtgaggaggacccgagcggcatggtgaccatcatcacaggccttccactggacaat
cctagcacgctctcaggccctatgcaggcagccttgcaggccgctgcacatgccagtgtg
gacatcaagaatgttctggacttctacaagcagtggaaggagattggctga
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