Bos mutus (wild yak): 102282392
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Entry
102282392 CDS
T02919
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
bom
Bos mutus (wild yak)
Pathway
bom04115
p53 signaling pathway
bom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102282392 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
102282392 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bom04121
]
102282392 (COP1)
Enzymes [BR:
bom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102282392 (COP1)
Ubiquitin system [BR:
bom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102282392 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102282392 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
102282392
NCBI-ProteinID:
XP_014336852
LinkDB
All DBs
Position
16:28690363..28913043
Genome browser
AA seq
731 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALGSGGAAQAAGSGG
LGGPARPVLVAAAVSGSGGGAVSAGLSRLSCAARPSAGVGGSSSSLSSGSRKRPPLAPLC
NGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNI
DHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNL
MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS
GLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRL
TAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNG
SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSS
YHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKL
WSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRK
AVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSE
NNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAAN
SQGTIKVLELV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggagccgccaggccggatcgggctccgccggcaccagcccgggctcctctgcg
gcctcctcggtgacttccgcctcctcgtccttatcctcttccccgtcgcccccttccgta
gcggcttcggcggcggcgctggggtccggcggggcggcccaggccgcgggctccggcggt
ctcgggggcccggcgcggcctgtgctggtggcggccgcggtgtccggcagcggcggcggg
gcggtgtccgcgggcctgtcccggctcagctgcgcggccaggcccagcgccggcgtagga
gggagcagttccagcctaagcagcggcagcaggaagcgacctccgctcgcccccttgtgc
aacgggctcatcaactcctacgaggacaaaagcaacgacttcgtctgccccatctgcttt
gatatgatcgaggaagcatacatgacgaagtgtggtcacagcttttgctacaagtgtatt
catcagagtttggaggataataatagatgtcccaagtgtaactatgttgtggataatatt
gaccatctgtatcctaatttcttggtgaatgagctcattctcaaacagaagcaaagattt
gaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggccacaggtggcaa
atatttcaggatttgttgggaactgaccaagataaccttgatttggccaatgtcaacctc
atgctggagttactagtgcagaagaagaaacaactggaagcagaatcacatgcagcccaa
ctacagatccttatggaattcctcaaggttgcaagaagaaataagagagagcaactggag
cagattcagaaggagttaagtgttttggaagaggatatcaaaagagtggaagaaatgagc
ggcttatattctcctgtcagtgaggatagcacagtgcctcaatttgaagctccttctcca
tcacacagtagtattattgattccacagaatacagccaacctccaggtttcagtggcagt
tctcagacaaagaaacagccctggtataacagcacattagcatcaagacgaaaacgactc
actgctcattttgaagacttagagcaatgttacttttctacaaggatgtctcgtatctca
gatgacagtcgaactgcaagccagttggatgaatttcaggaatgcttgtccaagttcact
cgatataattcagtacgacctttggctacattgtcatatgctagtgatctctataatggt
tccagcatagtttctagtattgaatttgaccgggattgtgactactttgcaattgctgga
gttacaaagaagatcaaagtctatgaatatggcacagtcattcaggatgcggtggatatt
cattaccctgaaaatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagt
tatcataagaatctattagccagcagtgattatgaaggcaccgtcattctatgggatgga
ttcacaggacagaggtcaaaggtctatcaggagcatgagaagagatgttggagtgttgac
tttaatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaagcta
tggtctaccaacctggataactcagtggcaagcattgaggcgaaggctaatgtgtgctgt
gttaaattcagtccttcttctagataccatttggctttcggctgtgcagatcactgtgtt
cactactatgatcttcgtaacactaaacagccaatcatggtattcaaaggacaccgaaaa
gccgtctcttatgcaaagtttgtgagtggtgaggaaatcgtctctgcttcaacagacagc
cagctaaagctgtggaatgtagggaagccatactgcctacgctccttcaagggccatatc
aatgaaaaaaactttgtaggccttgcttccaatggagattatatagcttgtggaagtgag
aacaactctctttacctgtactataaaggactttctaagactttgctaacttttaagttc
gacacagtcaaaagtgttctggacaaagaccgaaaggaagatgacacaaatgaatttgtt
agtgctgtgtgctggagggcacttccagatggggagtccaatgtgctgattgctgctaac
agtcagggtacaattaaggtgctagagttggtatga
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