Bos mutus (wild yak): 102282767 Help Entry 102282767         CDS       T02919                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism bom  Bos mutus (wild yak) Pathway bom04151   PI3K-Akt signaling pathway bom04510   Focal adhesion bom04512   ECM-receptor interaction bom04820   Cytoskeleton in muscle cells bom04926   Relaxin signaling pathway bom04933   AGE-RAGE signaling pathway in diabetic complications bom04974   Protein digestion and absorption bom05146   Amoebiasis bom05165   Human papillomavirus infection bom05200   Pathways in cancer bom05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:bom00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102282767 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102282767 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102282767 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102282767 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     102282767 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     102282767 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102282767 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     102282767 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102282767 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     102282767 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     102282767 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:bom04147]     102282767 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:bom00536]     102282767 (COL4A1) Exosome [BR:bom04147]  Exosomal proteins   Exosomal proteins of other cancer cells    102282767 (COL4A1) Glycosaminoglycan binding proteins [BR:bom00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102282767 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  102282767 NCBI-ProteinID:  XP_070236843 LinkDB All DBs Position 12:72274569..72408072 Genome browser AA seq 1669 aa AA seqDB search MGPRLGVWLLLLLAALLLHEESSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPSGVPGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGERGPVGPPGLPGFAGNPGPPGLPGMKGDPGEILGHIPGTLLKGERGYPGQ PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVSGPP GLPGQAQVITKGDTAMRGEKGQKGEPGFPGLPGFGEKGEPGKPGPRGKPGKDGEKGEKGS PGFPGDSGYPGQPGQDGLKGEKGEAGPPGLPGTVIGTGPLGEKGEPGYPGGPGAKGETGP KGFPGIPGQPGPPGFPTPGLIGAPGFPGDRGEKGEPGLPGVSLPGPSGRDGLPGPPGPPG PPGQPGHTNGIVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGDSCLVCDTAELRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIYFDIRLK GDKGDPGFPGQPGMPGRAGSPGRDGQPGLPGPRGSPGSVGLKGERGPPGGVGFPGSRGDI GPPGPPGFGPIGPIGDKGQIGFPGTPGAPGQPGPKGEAGKVVPLPGPPGAEGLPGSPGFQ GPQGDRGFPGSPGRPGLPGEKGAIGQPGIGFPGPPGPKGVDGLPGDAGPPGNPGRQGFNG LPGNPGPPGQKGEPGVGLPGLKGLPGIPGIPGTPGEKGNVGGPGIPGEHGAIGPPGLQGL RGDPGPPGFQGPKGAPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGQPGIPGPKGEMGVMGTPGQPGSPGPAGVPG LPGAKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGEKGDQGEKGQTG PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVSGVPGAPGLPGPKGPTGGMGLPG MPGPKGVAGIPGPQGVPGLPGDKGAKGEKGQAGLPGIGIPGRPGDKGDQGLAGFPGSPGE KGEKGSTGIPGMPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGIKGEAGLPGK PGPTGPAGQKGEPGSDGIPGSVGEKGESGLPGRGFPGFPGSKGDKGSKGDVGFPGLAGSP GIPGSKGEQGFMGPPGPQGQPGLPGTPGHAVEGPKGDRGPQGQPGLPGRPGPMGPPGLPG LEGLKGERGNPGWPGTPGAPGPKGDPGFQGMPGIGGSPGITGAKGDVGPPGVPGFHGQKG APGLQGVKGDQGDQGFPGTKGLPGPPGPPGPFSIIKGEPGLPGPEGPAGLKGLQGPPGPK GQQGVTGSVGLPGPPGEPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPTGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtctggctgctgctgctgctcgccgcgctcctgctccacgag gagagcagccgggccgccgcgaagggtgggtgtgccggctctggctgcgggaagtgtgac tgccatggcgtgaagggacaaaagggagaaagaggcctcccggggttacaaggggtcatc gggtttcccggaatgcaaggacccgaggggccacagggaccaccgggacagaagggtgac accggcgagcccggactgccaggcactaaaggcacgagaggaccctcaggagtgcctggt taccctggaaacccaggacttcctggtattcctggccaggatggtcctccgggtccccca ggtattccaggatgcaacgggacaaagggtgagagagggcctgtggggcctcccggtttg cctggattcgccggaaatcccggaccaccagggttaccgggaatgaagggagatccaggt gagattctgggccatataccagggaccctgctgaaaggcgaaagaggatatcctggacag ccaggagcgcccggctcaccaggtctgccaggactgcaaggccccgtcggccccccagga ttcactggaccgccaggccctccaggccctcctggccctccaggtgaaaaggggcagatg ggcttgagcttccaaggacccaaaggtgaaaagggtgatcaaggggtcagcgggccccca ggattgccaggacaggcgcaagtcatcacgaaaggagacacggccatgcgaggcgagaag ggtcaaaaaggtgaacctggatttccggggctgccagggtttggagagaaaggagaacct ggaaaaccagggccccgtggaaaaccaggaaaagatggtgaaaaaggagaaaaagggagt ccagggtttccaggcgactcagggtacccaggacagcctggccaagacggtttaaaggga gagaaaggtgaagcaggtcctcccgggcttcctggaactgttattggcacgggaccgttg ggagagaaaggagagcccgggtacccaggaggtccgggggcgaaaggggagacaggtccc aaaggtttcccaggaataccaggccagccaggccctccaggcttcccgactccggggctg attggtgcccccggcttccctggcgacagaggagagaagggtgaaccgggcttgccgggc gtgtcgctgccaggacccagtggaagggacgggcttcccggcccccctggcccccccggg ccccctgggcagccgggccacacaaatggaatcgtggaatgccagcctgggccgccaggg gaccagggtcctcccggaattccagggcagccggggttgacgggcgaagttggagaaaaa ggtcaaaaaggagacagttgcctcgtctgtgacacagcagagcttcgtgggcccccaggg ccacagggaccccccggagaaataggtttcccaggacagccaggagccaagggtgataga ggcttgcccggcagggacggtctggaaggactgcccggtccgcaaggtgcgccggggctc atgggccagccgggagccaagggcgagcccggtgagatctacttcgacatacggctcaaa ggcgacaaaggagaccccggcttcccaggccagcccggcatgccaggcagagcgggctcc cccggaagagacggccaaccgggtctgcccggccccagaggctccccgggttccgtagga ttgaaaggggagcgtggccccccgggaggcgtcggattccccgggagccgtggcgacatc ggccctccggggcctccaggctttggcccgattggccccattggtgacaaaggacagata ggcttcccaggaacccccggggccccaggccagccaggtcccaagggcgaggcggggaaa gtcgtgcccttgcccggcccccctggagcagaaggacttcccgggtcccccggcttccag gggccacaaggtgaccgaggttttcctggaagccccggaaggccgggcctccctggagag aagggcgccatcggccagcctgggattggatttcctgggcctcccggccccaaaggcgtt gatggtttacctggagacgctggacctcctgggaatccgggtcgtcaaggcttcaacggc ttacctggcaaccccggtccacctggacagaagggcgagcctggagttggtctgccggga ctcaaaggcctgcccgggatacctggcatccccggcacccccggggagaagggaaacgtc ggaggaccgggaattcctggagagcacggcgccatcggccccccaggcctccaggggctc agaggtgacccaggaccacctggatttcaaggccccaaaggagctccgggagtccccgga atcggcccccctggagcaatgggcccccccggaggacagggacccccagggtcatcaggc ccccccggagtgaaaggagagaaaggcttccccggcttcccaggcctggacatgccgggc cccaaaggagacaaagggtcccaggggctccccggcctgacggggcagtctgggctgcct ggccttcctggacagcagggcacccccggccagcctggcattccaggtcccaagggagag atgggagtcatggggactccagggcagcccggctcgccagggccagcgggcgtgccagga ttgccaggtgccaaaggggaccacggcttccccggctcttcgggacccaggggagaccct ggcttcaagggcgacaaaggcgacgtggggctccccggcaagccaggctccatggacaag gtggacatgggcagcatgaagggcgagaagggagaccaaggcgagaaaggacaaactggt ccgactggtgataaaggatcccggggagacccgggaaccccaggtgtgccgggaaaggat ggtcaggcaggacaccccgggcagccaggacctaaaggtgacccaggtgtgagcggggtc ccaggtgctccgggactccctggtcccaaaggacccactggtggaatgggcctaccggga atgccaggaccaaaaggtgtggctggcatccccggcccgcagggcgttcctggcttacct ggagacaagggggcaaaaggagagaaagggcaggcggggctgcctggcattgggattcca ggacggcccggggacaagggagaccagggcttagcaggatttcccggaagccccggcgag aagggagagaaaggaagcactgggatcccagggatgcccgggtccccgggccccaaaggc tccccaggaagtgttggctatccgggaagccctgggttgcctggagagaaaggtgacaaa ggcctcccgggactggatggcattcctggcatcaaaggagaagcaggtcttcctgggaag cctggccccacgggtccagccggccagaaaggggagcccggcagcgatggaatcccaggg tcggtgggagagaagggcgagtcaggtctacctggaagaggattcccagggtttccaggg agcaaaggagacaaaggttcaaagggcgatgtgggcttcccaggattagccgggagccca ggaattcctggatccaaaggagaacaaggattcatgggtcccccgggaccacagggacag ccgggattgccagggaccccaggccacgcggtagaggggcccaaaggagaccgcggcccg caaggacaacccggcctgccagggcgtccggggcccatggggcctccaggcctccccggg ctcgaggggctgaaaggtgaaagggggaacccaggctggccgggcactccgggagctcca gggcccaagggagacccaggattccagggcatgccgggcatcggcggctctccaggaatc acaggagccaagggtgatgtgggacctccaggagttccagggtttcacggtcagaaaggc gcccccggcctgcagggagtcaaaggtgaccaaggagatcaaggcttcccaggaactaaa ggtcttcccggccccccgggccccccaggtccattcagcatcatcaagggggaaccaggg ctccctgggcccgagggccccgcgggtctgaaagggcttcagggacctccaggcccgaaa ggacagcaaggtgtgacgggatccgtgggcttgcccgggcccccaggtgagcccggcttt gacggcgccccaggccagaaaggagagacggggcccttcggccctcccggtccacgtggc ttcccgggtccgcccggccccgacgggctgccgggatccatgggtcccccgggcacccca tcagtcgatcatggcttccttgtgacccggcacagtcagacaacagacgacccccagtgc cctcctgggaccaaaatcctctaccacggctactctttgctctacgtgcaaggcaacgag cgggcgcacggccaggacttgggcacggcgggcagctgtctgcggaagttcagtaccatg cccttcctcttctgtaacatcaacaatgtctgcaacttcgcgtcccgcaacgactactcg tactggctgtccaccccggagcccatgcccatgtccatggctcccatcacgggggagaac atccggcccttcatcagcaggtgtgctgtgtgtgaggccccggccatggtgatggccgtg cacagccagaccatccagatcccgcagtgccccaccggctggtcctcgctctggatcggc tactcctttgtgatgcacaccagcgccggggctgaaggctctggccaagccctcgcctcc cccggctcgtgtctggaggagttcagaagcgcccccttcatcgagtgccacggccgcgga acttgcaattactacgcgaacgcttacagcttttggcttgccacgatagagcggagcgag atgttcaagaagcccacgccgtccacgctgaaggccggggagctgcgcacgcacgtcagc cggtgccaggtgtgcatgcggaggacataa

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