KEGG   Bos mutus (wild yak): 102283562
Entry
102283562         CDS       T02919                                 
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
bom  Bos mutus (wild yak)
Pathway
bom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102283562 (XAB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bom03019]
    102283562 (XAB2)
   03041 Spliceosome [BR:bom03041]
    102283562 (XAB2)
Messenger RNA biogenesis [BR:bom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102283562 (XAB2)
Spliceosome [BR:bom03041]
 Complex B
  Other components
   Prp19-related factors
    102283562 (XAB2)
 Complex C
    102283562 (XAB2)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 TPR_12 TPR_2 TPR_8 Suf TPR_19 ARM_TT21 TPR_15 ARM_TT21_C TPR_1 TPR_NPHP3
Other DBs
NCBI-GeneID: 102283562
NCBI-ProteinID: XP_005890813
UniProt: L8IXQ5
LinkDB
Position
7:complement(56462792..56471698)
AA seq 855 aa
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRSIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPSRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq 2568 nt   +upstreamnt  +downstreamnt
atggtggtcatggcgcggctttcgaggcccgagcgaccggaccttgtgttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctccgtcaagtgctggctccgc
tacatcgagttcaagcagggggcccccaagcccaggctcaatcaactgtatgagcgggcg
ctcaagctgctgccctgcagctacaaactctggtaccgctacctgaaggcccgccgggca
caggtgaagcatcgctgcgtgactgaccccgcctatgaagatgtcaacaactgccatgag
agggcctttgtgttcatgcacaagatgccccggctgtggctggattactgccagttccta
atggaccagggacgtgtcacgcacacgcgccgaactttcgaccgggccctccgggcattg
cccatcacccagcactctcgtatttggcccctgtacctgcgcttcctgcgctcacacccc
ctgcctgagactgctgtacggggctaccggcgcttcctcaagctgagccccgaaagcgct
gaggagtatatcgagtacctcaagtcaagcgaccggctggatgaggcagcgcagcgcctg
gccaccgtggtgaacgacgaacgcttcgtgtcgaaggccggcaagtctaactaccagctg
tggcacgagctctgtgacctcatctcccagaaccctgacaaggtgcagtctctcaatgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgc
tcgctggctgactactacatccgtagcggtcacttcgagaaggctcgggacgtgtatgag
gaggccatccggactgtgatgaccgtgcgggacttcacccaggtgtttgacagctatgcc
caattcgaggagagtatgatcgcggcgaagatggagaccgcctcggagctggggcgggag
gaggaggatgacgtagacctggagctacgcctggcccgcttcgagcagctcatcagccgg
cggcctctgctcctcaacagcgtcctgctgcgccagaacccgcaccacgtgcacgagtgg
cacaagcgtgtggccctgcaccagggccgccctcgggagatcatcaatacgtacacggag
gctgtgcagacggtggaccccttcaaagccaccggcaagccccacacgctgtgggtcgcg
tttgccaagttttacgaggacaacgggcagctggacgatgcccgcgtcatcttggagaaa
gccaccaaggtgagtttcaagcaggtggacgacctggccagtgtgtggtgcgagtgtgga
gagctggagctccggcatgagaactacgaccaggccttgcgacttctgcggaaggcgaca
gcgctgcctgcccggcgcgctgagtactttgatggctcagagcctgtgcagaaccgtgtg
tacaagtctctgaaggtgtggtccatgctggccgacctggaggaaagcctcggcaccttc
cagtccaccaaggcagtgtatgaccgcatcctggacctgcgcatcgccacgccgcagatc
gtcattaactacgccatgttcctggaggagcacaagtactttgaggagagcttcaaggca
tacgagcgcggcatctcgttgttcaagtggcccaacgtgtcggacatctggagtacctac
ctgacgaagttcattgcccgctacgggggccgcaagctggagcgggcacgcgacctcttt
gagcaggcgctggatggctgccctcccaaatatgccaagacgctgtacctgctgtacgcg
cagctggaagaagagtggggcctggcgcggcacgccatggcagtgtatgagcgtgccacc
agggctgtggagcccgcgcagcagtacgacatgttcaacatctacatcaagcgggcggct
gagatctacggggtcacccacacccgcagcatctatcagaaggccattgaggtgctgtct
gacgagcacgcccgggagatgtgcctgcggttcgccgacatggagtgcaagctcggggag
atcgaccgcgcccgggccatatacagcttctgctcgcagatctgcgacccccggacgacc
ggggccttctggcaaacgtggaaggactttgaggtccggcatggcaacgaggacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacatacaacacacaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagcgccacgggcaccgtgtccgacctggcc
cccgggcagagcggtatggatgacatgaagctgctggagcagcgtgccgagcagttggcg
gccgaggcagagcgggaccagccctcaagggcccagagcaagatcctgtttgtgaggagt
gacgcctcccgggaggagctggctgagctggcccagcaggccaacccagaggagattgag
ctgggcgaggacgaggatgaggatgaaatggacctggagcccaacgaggtgcgcctggaa
cagcagagcgtgccagccgctgtgttcgggagcctgaaggaagactga

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