Bos mutus (wild yak): 102284345
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Entry
102284345 CDS
T02919
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bom
Bos mutus (wild yak)
Pathway
bom03082
ATP-dependent chromatin remodeling
bom04714
Thermogenesis
bom05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102284345 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102284345 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102284345 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bom03021
]
102284345 (SMARCC2)
03036 Chromosome and associated proteins [BR:
bom03036
]
102284345 (SMARCC2)
Transcription machinery [BR:
bom03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102284345 (SMARCC2)
Chromosome and associated proteins [BR:
bom03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102284345 (SMARCC2)
PBAF complex
102284345 (SMARCC2)
GBAF(ncBAF) complex
102284345 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
102284345
NCBI-ProteinID:
XP_070226475
LinkDB
All DBs
Position
5:complement(15134943..15154264)
Genome browser
AA seq
1243 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNSASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDESSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQNSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEDKKEPKEPREGVGTVEEEAKEKTSEAPKKDDEKGKDGDSEKE
SEKSDGDPTADPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPPGAAGPPTVHGLAMA
PASVAPAPAGSGAPPGSLGPSEQLGQAGSTVGPQQQPPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPAPSIIPFGSLADSISINLP
PPPNLHGHHHHLPFAPATLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSP
AIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatatacaa
gccgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaagacattatc
aagagacatcagggaacggtcactgaggataagaacagtgcctcccacgttgtgtatccc
gttccagggaacctggaggaagaggaatgggtacggccagtcatgaagagagacaagcag
gttcttctgcactggggctactatcctgacagttatgacacatggatcccagccagtgaa
attgaagcgtctgtggaagacgctccaactcctgagaaacctaggaaggttcatgcaaaa
tggattctggacacagacaccttcaatgagtggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacgctgacagatgag
gtgaacagcccagattcagaccgacgggacaagaagggggggaactataagaagaggaag
cgctccccctcaccttcaccaaccccagaagccaagaagaagaatgctaagaaaggtcct
tcaacaccttacaccaagtcaaagcgaggccacagagaggaggagcaagaagacctgaca
aaggacatggatgaaccctcaccggtccccaatgtggaagaggtgacattgcccaagaca
gtcaacactaagaaggactcggagtcagccccagtcaaaggaggcaccatgactgacctg
gatgaacaagaggacgaaagcatggagaccacgggcaaggatgaggacgagagcagcacg
ggcaacaagggggagcagaccaagaacccagacctgcatgaggacaacgtgactgagcag
acccaccacatcatcatcccgagctatgctgcctggtttgactacaacagtgttcacgcc
atcgaacggagggctctccctgagttcttcaatggcaagaacaagtccaagactccagaa
atctacctggcctatcggaacttcatgattgatacttaccggctgaacccccaggagtat
ctcacgtccactgcctgtcgcaggaacctggcgggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtctcattaactaccaggtggatgccgagagtcgacca
actcccatggggcctccgcccacctctcacttccacgtcttggcggacacaccatccggg
ctggtgccgctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagaactctgcttcccagcaaatgctcaacttccctgacaaaggcaaggagaaaccg
acagacatgcagaactttgggctgcgcacagacatgtacacgaagaagaacgtcccctcc
aagagcaaagctgcagccagtgccactcgagagtggacagaacaggagaccctgctgctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtcagagcacgtgggaagc
cgcacacaggatgaatgcatcttgcattttctccggcttcccatcgaagacccgtacctg
gaggactcagaggcctccctgggccccctggcctaccagcctatccccttcagccagtca
ggcaaccctgtgatgagcaccgttgccttcctggcctctgtcgtcgaccctcgagtggcc
tcagctgctgcgaagtcagccctagaagagttctccaaaatgaaggaagaggtacccaca
gctttggtggaggcccacgttaggaaagtggaagaagccgccaaagtgacaggcaaggca
gacccagcctttggtctggaaagcagtggcatcgcagggaccacctctgatgagccggag
aggatcgaggagagtgggactgacgaagcgcgggcagagggccaggccacagaggataag
aaggaacccaaggaacctcgagaaggagttgggactgtggaggaagaagcaaaggagaag
accagtgaggcacccaagaaggacgatgagaaagggaaggatggcgatagcgagaaggag
tcagaaaagagtgatggagacccgacagcggatcctgagaaggagaaggagcccaaggaa
gggcaggaggaggtgctgaaagaagtggtggagtcggagggggaaaggaagacgaaggtg
gagcgtgacattggcgagggcaacctctccaccgccgccgccgccgccctggctgctgcc
gctgtgaaggccaagcacttggctgctgttgaggagaggaagatcaaatcgctggtggcc
ctgctggtggagacccagatgaaaaagttggaaatcaaactccggcactttgaggagcta
gagacgatcatggaccgggagcgagaagcactggagtaccagaggcagcagctcttggcc
gacagacaagccttccacatggagcagctgaagtacgcagagatgcgggcccggcagcag
cacttccagcagatgcaccaacagcagcagcagccaccaccagccctgcccccgggctcc
cagcctatcccaccaccaggcgctgctgggccacccactgtccatggcttggccatggct
ccagcctctgtggccccggctcctgcgggcagtggggcccctcctggaagcttggggccc
tccgaacagcttgggcaggcagggtcaactgtggggccacagcagcagccaccagctggc
gccccccagcctggggccgtcccaccaggggtacccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctccccct
cctgctccatccatcatcccatttggtagcctagccgactccatcagtattaacctcccc
cctcctcctaacctgcatgggcatcaccaccatctcccgtttgccccggccactctcccc
ccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgaccacc
accatgccatcttctttgcctcttgggccggggctcggatccgccgcagcccagagccct
gccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagaccca
ggcacccccctgcctccagaccccacggccccgagcccaggcacagtcacccccgtgcca
cccccacagtga
DBGET
integrated database retrieval system
