Bos mutus (wild yak): 102284633
Help
Entry
102284633 CDS
T02919
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bom
Bos mutus (wild yak)
Pathway
bom00100
Steroid biosynthesis
bom01100
Metabolic pathways
Module
bom_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102284633 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bom01006
]
102284633 (FDFT1)
Enzymes [BR:
bom01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102284633 (FDFT1)
Prenyltransferases [BR:
bom01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102284633 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
102284633
NCBI-ProteinID:
XP_005886749
UniProt:
A0A6B0RHE8
LinkDB
All DBs
Position
8:103832767..103862307
Genome browser
AA seq
417 aa
AA seq
DB search
MEFVKCLGHPEEFYNLLRFQMGGRRKVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQA
LDGEMRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQ
VLEDFPTISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVG
IGLSRLFSASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQREGREFWPQETWSKYV
KKLGDFAKPENIDLAVQCLNELITNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATL
AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTKTQ
QIISTIRTQNLPNCQLVSRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtgaagtgcttggggcaccctgaggagttctacaaccttctgcgcttccag
atggggggccggcggaaggtgatacccaaaatggaccaggactcgctcagcagcagcttg
aaaacatgctacaagtacctgaatcagaccagtcgcagtttcgcagctgttatccaggcg
ctggatggggaaatgcgccatgcagtatgcatattttatctggttctccgagctttggac
acactggaagatgacatgactatcagtatagaaagaaaagtgccactgctacacaacttc
cactcatacctttatgagcctgactggcggttcacggagagcaaggaaaaggaccgacaa
gtcctggaggacttcccaacgatctccctggagtttcgaaatctggctgagaaatatcag
acagtgattgttgacgtttgccagaagatgggctttgggatggcggagtttctggataag
cgtgtgacgtctgaacgggagtgggacaagtactgtcactatgttgctgggctagtggga
attggcctctcccgtctcttctcggcctcggagttagaagaccccttaattggcgaagac
acagagcgagccaactctatgggccttttcctgcagaaaacaaacatcatccgtgattat
ctggaagaccagcgagaagggagagagttttggcctcaagagacttggagcaagtacgtg
aagaagctgggtgactttgctaagccagagaacattgacttggctgtgcagtgtctgaat
gaactcatcaccaacacactgcaccacatccccgacgtcatcacctacctgtcacgactt
cgaaaccagagtatttttaacttctgtgctattccacaggtcatggccattgctactttg
gctgcctgttacaataatcagcaggtgttcaagggggtggtgaagattcgaaaagggcaa
gcagtcaccctgatgatggatgccaccaacatgccagctgtaaaagccataatacaccag
tacatggaagagatttatcacagaattcccaactctgacccctgttccactaaaacacag
cagatcatctccaccatcaggacacagaatctccccaactgtcagctggtctcgcggagc
cactactcgcccatctacctgtcgttcgtcatgctcctggcggccctgagctggcagtac
ctgagcaccctgtcccaggtcacagaggactacgttcagaccggggagcactga
DBGET
integrated database retrieval system