Bos mutus (wild yak): 102285554
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Entry
102285554 CDS
T02919
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
bom
Bos mutus (wild yak)
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bom01001
]
102285554 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bom04121
]
102285554 (TRIM28)
Enzymes [BR:
bom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102285554 (TRIM28)
Protein kinases [BR:
bom01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
102285554 (TRIM28)
Ubiquitin system [BR:
bom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102285554 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
PHD_2
PHD-1st_NSD
zf-C3HC4
YaaC
Bromodomain
Motif
Other DBs
NCBI-GeneID:
102285554
NCBI-ProteinID:
XP_014335824
LinkDB
All DBs
Position
18:complement(43000..49323)
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AA seq
837 aa
AA seq
DB search
MAASAAAASAAAAAASGSPGPSEGSAGAEKRAAASSAAGSASGSAAASASASSPAGGGGE
ALELLEHCGVCRERLRPEREPRLLPCLHSACSACLGPPAPAAANSSGDGGAAGDGSVVDC
PVCKQQCFSKDIVENYFMRDCGGKAATDSQDANQCCTSCEDNAPATSYCVECSEPLCETC
VEAHQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAH
KDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKM
AILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDN
NTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNS
TGPAPMAPPRAPGPLGKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGVKRPRSGDGEV
SGLMRKVPRVSLERLDLDLTADSQPPVFKVFPGNTTEDYNLIVIERGAAAAAAGQPGTAP
SGVPGAPPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMALGEGPGAEGPRLASPSGS
TSSGLEVVAPEGTSVPAGGPGSLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQD
VPGEEWSCSLCHVLPDLKEEDGSLNLDGGDSTGVVAKLSPANQQKCERVLLALFCHEPCR
PLHQLATDSTFSPDQPGDTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTED
KADVQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLSAQDLSTGPGEGP
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcggctgcggcggcctcggcggcggcggcggccgcctccggcagccccggc
ccgagtgagggctcggcgggcgccgagaagcgcgccgccgcctcctcggccgcgggctcc
gcgtcgggctcggcggcggcatccgcctcggcgtcgtcacccgcggggggcggcggcgag
gcgctggaactgttggagcactgcggcgtgtgtcgggagcgcctgcggccggagagggag
ccgcgcctgctaccttgcctgcactcggcctgcagcgcctgcctcggacccccggcgcct
gcagccgccaacagctcgggggatggaggtgcagcgggcgacggttctgtggtggactgt
ccagtatgtaagcagcaatgtttctccaaagatatcgtggagaattatttcatgcgagac
tgtggcggtaaggccgccacggattcccaggatgctaatcagtgctgcactagctgtgag
gataatgccccagccaccagttattgtgtggagtgctctgagccgctctgtgagacgtgt
gtggaggcgcaccagcgggtgaagtacaccaaggaccacaccgtgcgctccactgggccg
gccaagtcgagggacggtgagcgcactgtgtattgcaatgtgcacaagcacgagcccctt
gtgctgttctgcgagagctgcgacaccctcacctgccgggattgccagctcaacgcccac
aaagaccaccagtaccagttcctggaggatgcagtgagaaaccagcgcaagctcctggcc
tcattggtgaagcgcctcggggacaagcatgcaacactgcagaagaacaccaaggaggtt
cgcagctcgatccgccaggtgtccgacgtacagaagcgcgtgcaagtggacgttaagatg
gccatcctgcagataatgaaggaactgaacaagcggggccgtgtgctggtcaacgacgcc
cagaaggtaacagaggggcagcaggagcgcctggaacggcagcactggaccatgaccaag
atccagaagcaccaggaacacatcttacgctttgcctcttgggctctggagagtgataac
aacacggctctgctgctctccaagaagctgatctacttccagctgcaccgggcccttaag
atgatcgtggaccccgtggagccccacggcgagatgaaatttcagtgggacctcaacgcc
tggaccaagagtgcagaggcctttggcaagattgttgcagagcgtcctggaaccaactcc
acgggcccagcaccaatggcccctcctcgggctccggggcctttgggcaagcagggctct
ggcagcagccagcctatggaggtgcaggaaggctacggcttcggatcagatgacccttac
tcgagtgctgagccccatgtgtcaggggtgaagcgaccccgctcaggtgacggcgaggtg
agtggcctcatgcgcaaggtgcctcgggtgagcctcgaacgcctggacttggatctcacg
gctgacagccagccaccagtctttaaggtcttcccaggcaacaccactgaggattacaac
ctcatcgtcatcgagcgaggtgctgccgccgcagctgctggccagcctgggactgcgccc
tcgggggtccctggggcccctcccctgcctggaatggccattgtcaaggaggaagaaaca
gaggctgccattggagctccaccagctgccaccgagggcccggagaccaaacctgtgttg
atggccctgggggagggccctggtgcggagggtccccgcctggcttcacccagtggcagc
accagctcaggtctggaggtggtggctccagagggcacctcagtcccagctggtggccca
ggttccctggatgacagtgccaccatctgccgtgtctgccagaagccaggtgacctggtc
atgtgcaaccagtgcgaattctgcttccacctggactgccacctgcctgccctgcaggat
gtgccaggggaggagtggagctgctctctttgccacgtgctgcctgacctgaaggaggag
gatggcagcctgaacctggatgggggggatagtaccggagtggtggccaagctctcacca
gccaaccagcagaagtgtgagcgcgtcctgctggccctcttttgccacgagccctgccgg
cctctgcaccagctggctactgactccaccttctccccagatcagcctggtgacaccctg
gacttgacccttatccgagcccgcctccaggagaagctgtcacccccctacagctccccc
caggagtttgcccaggatgtgggccgcatgttcaagcagttcaacaagctgacggaggac
aaggccgacgtgcagtccatcattggcctacagcgcttctttgagacccgcatgaatgag
gccttcggggacaccaagttctccgctgtgctggtggagcccccgccgctgagcctgcct
ggtgctggcctgagtgcccaggacctctctactggccctggtgagggcccctga
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