Bos mutus (wild yak): 102286259
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Entry
102286259 CDS
T02919
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
bom
Bos mutus (wild yak)
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bom03041
]
102286259 (DDX1)
03016 Transfer RNA biogenesis [BR:
bom03016
]
102286259 (DDX1)
Enzymes [BR:
bom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102286259 (DDX1)
Spliceosome [BR:
bom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102286259 (DDX1)
Transfer RNA biogenesis [BR:
bom03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
102286259 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
102286259
NCBI-ProteinID:
XP_005891100
LinkDB
All DBs
Position
11:24011183..24051350
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AA seq
778 aa
AA seq
DB search
MDGSPAVPGIRVKPSQTVQSSPPAECTQGNDPSSYCVEHKNQSEMGVMPEIAQAVEEMDW
LLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKATIK
TGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLTKGKHYYEVSCHDQ
GLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH
VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP
ESFVVKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAEQTLNNVKQFKKYIDNPKLRELL
IIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD
FINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH
HVVVPVNPKTDRLWERLGKSHIRTDEVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK
EHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK
KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE
KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD
EFDGKVTYGQKRTLGGGNYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggatgggagccctgcagtaccaggcattagagtgaagccttctcagaccgtccagtcc
agcccaccagctgaatgcacccaagggaatgaccccagctcatactgcgtcgaacataag
aaccagtcagagatgggtgttatgcctgagattgcacaagccgtggaagagatggattgg
cttctcccaactgatatccaggctgaatcgatccccctcatcctaggaggaggtgatgtc
cttatggctgcagaaacaggaagtggaaaaactggggctttcagtattccggttattcag
atagtgtatgaaactctgaaagaccaacaagaaggcaaaaaaggaaaagcgacaattaaa
actggtgcttcagtgctgaacaaatggcaaatgaacccatatgacagaggatctgctttc
gcaattggctcagatggtctttgttgtcagagcagagaagtaaaggagtggcatgggtgc
agagccaccaaaggcctaacgaaagggaagcactactatgaggtatcctgtcatgaccaa
gggttgtgcagagttgggtggtcttccatgcaagcatccctagatcttggtactgacaag
tttggatttggctttggtggaacagggaagaaatcccacaacaagcagtttgacaattat
ggagaggaattcactatgcatgataccattggatgttacctagatatagataaagggcat
gtcaaattctccaaaaacggcaaagatcttggtctggcatttgaaataccaccacatatg
aagaaccaagccctgttccctgcctgtgttttgaagaatgcggaactcaaatttaacttt
ggggaagaagaattcaagtttccaccgaaagatggtttcgttgccctttccaaggcgccg
gagagtttcgttgtcaagtcgcagcacacaggtagtgcacaggtggcgcaaacaaagttt
ctccccaatgctccaaaagctctcatcgttgagccttcccgggagttggctgaacaaact
ctgaataacgtcaagcagtttaagaaatacatcgataatcctaagttaagggagcttctg
ataattggaggtgtcgcagcacgggatcagctctctgttttggataatggggtggatatt
gtcgttggcactccaggaagactggatgatctggtgtctaccggaaagctgaacttatcc
caagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttactctgac
tttatcaataggattcacaatcagattcctcagattacctctgatggaaaaagacttcag
gtgattgtgtgctcagccactttgcattcttttgatgtgaagaaactgtctgagaagatc
atgcactttcccacgtgggtcgatttgaaaggagaggattccgtcccagatactgtccac
cacgttgttgtcccagtgaaccccaaaacggacaggctctgggaaaggcttgggaaaagc
cacattaggactgatgaagttcatgcaaaagataacacaagacctggtgctaacagtcca
gagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgagccatcaag
gaacacaagatggatcaagcaattattttctgtagaaccaagatcgactgtgacaacttg
gagcagtattttatgcagcaaggaggaggacctgataaaaagggacatcagttctcgtgt
gtttgtcttcatggtgacagaaagcctcatgagaggaagcaaaacttggaaagattcaag
aaaggagatgtcagattcttgatatgcacagatgtagctgccagaggaattgatatccac
ggtgttccttatgtcataaatgtcaccttgcctgatgaaaaacaaaactatgtccatcgc
attggcagagtaggaagagctgaaaggatgggtctggccatttccctggtggcaacagaa
aaagagaaggtttggtatcatgtatgtagcagccgtggaaaagggtgttataacacaaga
ctcaaggaagatggtggctgtaccatatggtacaatgagatgcagttgctgtccgagata
gaggaacacctgaactgtaccatttctcaggttgagccagatataaaagtaccagtagat
gaatttgatgggaaagttacttacggccagaaaagaactcttggtggtggaaactataaa
ggccacgtggatattttggctcctacggttcaagagttggctgcccttgaaaaggaggcc
cagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttctga
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