Bos mutus (wild yak): 102286273
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Entry
102286273 CDS
T02919
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
bom
Bos mutus (wild yak)
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bom04131
]
102286273 (VPS13A)
Membrane trafficking [BR:
bom04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
102286273 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Motif
Other DBs
NCBI-GeneID:
102286273
NCBI-ProteinID:
XP_005893044
UniProt:
L8IT59
LinkDB
All DBs
Position
8:complement(58797695..59081190)
Genome browser
AA seq
3173 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLSLGIWAGAVALKNLEIKENALSQLDVPFKIKVG
HIGTLNLIIPWKNLYTQPVEAVLEGVYLLIVPSSRIKYDPIKEEKQLFEAKQQELKRIEE
AKRKVADQEKQLVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDVTNRENPLSFGISLQ
NLSMQTTDQYWIPCLHDETEKLFRKLIRLDNLFAYWNVKTQLFYLSNYDESVSSLRNGIV
DENIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKIDLDVELHDITIQLNKPQYFSFME
LLESVDMMTQNVPYRKFKPDVPLRYHAKEWWAYAIHGILEVNIRPHLRMWSWKHIREHRQ
KMKQYKELYKKKLTSKKPSGELLNSLEDLEKTLDVFNITVARQQAEVEVKKAGYRIFREG
AEESEGNKGWFSWMWSWSESHSKQQLDIKPGSLEEILTPKEKSLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIILREQQQKPELLDIVVEEFSTLIVQRPGAQAVKFETKIDSFH
VTGLPDNSTKPRLLSSLDDAASLLKIMFEINPLDETVAQRCIIEAEPLEMLYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTATGLVYIIETQKVLDLKINLNASYIIIPQD
GIFSPTSNLLLLDLGHLKVTSKIRSELPDLKQGGANREEIMHRAYDSFDIQLTSIQLLFS
RVGDNWKEARKLNVSAQHILVPMHFNVELSKAMVFMDISMPKFKIYGNLPLISLRISDKK
LQGILELIESIPKPSPATEVNVPVKSSQVQRSTSLGTSQMSQKKFPLLEIPCVEDDSDEE
FFDAPCSPLEEPLQSPSRIKSPQQKNLQKPDCFKNMIEYKIRFEVPEVLIQFCHLVGDCE
LPVVEINVLGLGTDIELRTFDLKANAFLKEVCLKCPDYFDENKKPVYLITTLDNTMEDLL
TLEYVKAENNLPATILKNAYNSVVQLIKVNFSSLDIHLHTEALLNTINYFNNILPYLEEK
PAPVHVVETEDKEEVVKKIPLKSSKNEDTITLQILAELSCLQIFIQDQKRNISEIKIEGL
DCEIIMRPSVTETNAKLRNIIVLDSDITAVYKKAVYITGKEVFSFKMVSYMGATAGSAYT
DMNVVDMQVNLTVGCIEVVLVKKFLYSILAFIDNFQAGKQALAEATVQAAGMAATGVKEL
AQRSSRMALDVHIKAPVVVIPQSPVSENIFVADFGLITMKNTFHVITKSPTNPPPIIDLI
TIKLSEMRLYRTQYINDAYQEVLDLLLPLNLEVMVERNLSWEWFQEVPCFNLNAQLKPME
FILSQEDITTIFKTLYGNIWYEGDSASHEVTKDQSSVTSGATTASHHAAGTTVVTAAVVE
VHSHASQVKTTLNMSFRTDYLTMVLYSPGPKQTSFTDIRDPSLKLAEFKLENIISTLKMY
TDDSILSSFSLKNCILDDKRPHIKKATPRMIGLTVGFDKKDMMDVRYRTIRDGWVADIVL
QEMYICASVEFLLTVANVFLEAYTTGTAVETNVQTWSAKEEVPKQQSEKWEMNITIKNPE
IVFVADMTRNDAPALVITTQCEIYWLGDFENDTMTAAIKDLQVRACPFLPVKRKGKITTV
LQPCDLFCQATQISTDPQVLELSVKSLTLKVSPVIINTVITITSALYTAKETIPKETASS
TAHLWEKKDTKDLNMWFLEEPNEAVKRAPMPELVPKGEIIKMNIDSIFLVLEAGIGHRTV
PMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNL
GIKMKKKAKKAIVESGTEEENYRVPEYKTVITFYSKDQLNITLSKCGLIMLNNLAEAFTE
AATGSSATFIRDLAPFMILNSLGLSISVSPSESFSVLNVPMAKSYVLKNEESLSMDYMRT
KDNDHFNAMTSLSSKHFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQID
AVEGSKKVTVRSPVQIRNHFSIPLSVYGGDTLLGTASPGSEFNIPLASYRSLLSLKPEDA
DYQMCEGIDFEEIIKQDGTSFKKKCRPINPSRKPFIINIVPEKDNLTYMSVYSEDRWDLP
YIIHLWPPILLRNLLPYKIAYYIEGIEHRVFTLHEGRSAQLCTVQLDKARLHLKLLDYLN
HDWKSEYHIKPNQQDISFISFTCVTEIEKTDLDIAVHVTYNTGQTIMAFHSPYWMVNKTG
RMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGA
VKCKGPKMEYQVGVTIDLSSFNITRIVTFTPFFLIKNKSKYHISVAEEGNDKWLALDLEQ
CVPFWPEDASNKLLIRVERSESPPHKIHFNKEESCILLRLDNELGGIIAEVNLAEHSTVI
TFSDYRDGAATFLLINHTKNDIVQYKQSSLSEIEDSLPPGKAVFYTWADPVGSRKLQWKC
GKSHGEVTQKDDMMTPINLGKTTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQ
EIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPRKKARWKPMSVKHTEKLEKEFK
EYVESSPSEDKVIELDTNILVRFTPGASNMKILQPHVIAIRRNYLPALKVEYSTSAHQSS
FRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTLDSAPKPFTDVSIVMRSAGHSQISRIK
YFKVLIQEMDLRLDLGFVYAVSELMTPAEVTEKTEVELFHKDIEAFQEEYKIVSLVDSSQ
VSLYEYFHISPIKLHLSVSLSSGGEEPKDSEQHEGLMAIRSLHLLLKSIGATLTDVQDVV
FKLAFFELNYQFHTTAELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEA
FFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQ
QKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGATGFFKGVGKGL
VGAVTRPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQM
LQVMENGRFAKYKYFTHVMINKTDMLMITRSGVLFVTKGTFGQLTCEWQYSFDEFTKEPF
IVHERRLRIEAKERVKSVFHAKEFGKIVNFRTPEDARWILRKLEEAREPSPNL
NT seq
9522 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcagtctgggcatctgggcaggagctgtggccctgaagaat
cttgaaattaaagaaaatgccctgagtcaactggacgtaccatttaaaattaaagttggc
catataggtactcttaatcttataattccatggaaaaacctttatacccaaccagttgaa
gctgtattggaaggcgtttatttactcatagtgccttcttctagaataaaatatgatcct
ataaaagaagaaaaacaactctttgaagcaaagcaacaggaattgaaaagaatagaagaa
gcaaaacgaaaagtagctgatcaagaaaaacagcttgtggagaaacaggacactttcaca
gaaaaattaattacccagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgctatgaagatgatgtcacaaatcgagaaaaccctctgtcatttggtatttcccttcag
aatctcagcatgcagacaactgatcaatactggattccatgtttacatgatgaaactgag
aaattatttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagact
cagttgttttatcttagtaattatgatgaatcagtgagcagcctgaggaatggcattgtt
gatgaaaatattgttccagaaggttatgattttgtatttcgccccatatctgccaatgcc
aaacttcagatgaatcgcagatcggattttgacttttctgcccccaaaatagacctggat
gttgagttacatgacataacaattcaacttaataaaccacagtatttcagttttatggaa
cttcttgaatcggttgatatgatgacgcaaaatgtaccatataggaaattcaaacctgat
gtacctcttcgttaccatgccaaagaatggtgggcttatgctatacatggtatccttgaa
gtaaacattcgcccccacttacggatgtggtcctggaagcatattagagaacataggcaa
aaaatgaagcaatataaagaactgtataaaaaaaagctaacaagtaagaagccatctggt
gaacttctcaactctttggaggatttggaaaagactttggatgtgtttaatataactgtg
gcaagacaacaggcggaagttgaggtaaagaaagctggatacaggattttcagagaagga
gcagaagagtccgagggcaataaaggatggtttagctggatgtggagttggtcagaatcg
catagtaaacaacaactagatattaaacctggaagtcttgaagaaatattgacacctaaa
gaaaaaagtttgctgtatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagcaatgaagttctttgttcacttgaaaagtatgtctattattcta
agagaacaacaacaaaaacctgaactgctagatattgtagtggaagaatttagtactttg
attgtgcaaagaccaggagcacaagcagttaaatttgaaaccaaaatagattcatttcat
gttactggcttaccagataactcaacaaaaccccgcctcctgtcttcattagatgatgct
gcatcactcttgaaaattatgtttgagataaatcctttagatgaaactgttgctcagagg
tgtatcatagaagctgaacctttagaaatgttatatgatgcaagaacagtgaatagtata
gtagaattcttcagacctccaaaagaggtaaatctagcacagctgacttcagtaactttg
acaaaacttgaagaatttcgtgataagacagcaacaggtctggtatatattattgaaaca
cagaaagttcttgatctcaaaattaacttgaatgcttcatatatcattatcccacaagat
ggtatctttagccctacgtcaaatctccttcttttggatcttggacatctaaaggtgaca
agtaaaattcgttcagaattaccagatttaaaacaaggtggagccaatcgtgaagagata
atgcatagagcttatgattcctttgatattcagcttacaagcatacagctgcttttcagc
agagttggtgataattggaaagaagcacgaaaactcaatgtgtctgcacagcatatcttg
gtacctatgcacttcaatgtggagctctctaaggccatggttttcatggatataagtatg
cccaaattcaagatttatggaaacttaccattaatttctttacgaatctcagataaaaaa
ctgcaagggattttggaactgattgaaagcattccaaaaccctcacctgcaactgaagta
aatgtgcctgtcaaatcatctcaggttcaaagatccacttctttgggaacatcacagatg
tcacagaagaaatttcctcttttggaaattccatgtgttgaagatgattcagatgaggag
ttttttgatgcaccatgtagtccattggaagagcctcttcaatcaccatctagaattaaa
agtcctcaacagaaaaatcttcagaaaccagattgttttaaaaatatgattgagtataaa
ataagatttgaagtgccagaggttttgattcagttctgtcaccttgttggagactgtgaa
ctacccgtggtagaaattaatgtcttaggattgggcacagatattgagcttagaacattt
gatttgaaagcaaatgcctttttgaaagaggtctgcttaaaatgtccagattattttgat
gaaaacaagaaaccagtttatttgattacaacactggataacacaatggaagatctctta
acactggaatatgtgaaggctgaaaataatttacccgcaacaatattgaagaatgcttat
aacagtgttgtgcaactgataaaggtgaatttttcctctttggatattcatttacatact
gaagcacttttgaatacaataaattattttaataatatccttccatatttggaggaaaaa
ccagccccagtgcatgttgtggagactgaagacaaagaggaggttgttaaaaaaatacct
ttaaaatcatccaagaatgaagatactattaccttgcagattttagcagaattatcatgt
ttacagatctttattcaagatcagaaacgtaacatttccgaaattaagatagaagggctt
gattgtgaaatcattatgaggccatcagtgactgaaacaaatgcaaagctaaggaatata
attgtcctggattctgatataacagctgtatacaaaaaggctgtttatattaccggaaaa
gaagttttcagcttcaaaatggtttcttatatgggtgcaactgctggttctgcatacaca
gatatgaatgtagttgatatgcaagttaatttaactgttggttgcattgaagtagttctt
gtcaaaaaatttctgtattctatattggcttttatagataattttcaagcaggtaaacaa
gccttagcggaggcaactgttcaggcagcaggaatggctgctactggtgtaaaagaactg
gcacagaggagttctagaatggcattggatgttcacatcaaagcccctgttgtggttatc
ccacagtctccagtttctgaaaatatttttgttgctgattttggactaattacaatgaaa
aatacattccatgtaataacaaagagtccgaccaaccccccacccattattgatttgata
acgataaagctaagtgaaatgcgactatacaggactcaatatattaatgatgcataccag
gaagtactggatctactattgccattaaatcttgaggtgatggttgagcgaaatttatcg
tgggagtggttccaggaagttccttgtttcaatctaaatgctcagctaaagcccatggag
ttcattcttagtcaagaagatataacgaccatttttaaaacattatatggcaacatatgg
tatgaaggtgatagtgcttcacatgaggtaacaaaggatcagtccagtgttactagtggt
gctactactgcgtcacaccatgcggcaggaacaactgtagtgacagctgctgtggtagaa
gtacattcacatgcttctcaagttaagacaacactaaatatgagtttcagaaccgattat
ctcaccatggtactgtatagtccaggtcctaaacagacttcgtttacagatattcgtgat
ccttctctgaaacttgctgaatttaagttggagaatattataagcactttaaaaatgtat
acagatgactcaatactttcttccttctcattaaaaaactgtattttagatgacaaaagg
cctcatatcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaag
gacatgatggatgtaaggtataggacgatccgagatggttgggtggctgatatagtcctt
caagaaatgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttctt
gaggcctacactacaggcactgctgtagaaaccaatgttcaaacatggtctgctaaagaa
gaagtacctaaacagcaatcagaaaagtgggaaatgaacatcactattaaaaatcctgaa
attgtgtttgtcgctgatatgacaagaaatgatgctcctgccttagtcattacaacacag
tgtgaaatatattggctaggtgactttgaaaatgatacaatgactgctgccattaaagat
ctccaagtgagagcatgcccatttcttccagtcaagagaaaaggaaaaatcactactgtt
ttgcaaccctgtgacttgttctgtcaagctactcagataagtacagatccacaagtactt
gaattatcagtaaaatccctgacactgaaggtttcaccagttatcataaatactgtgatt
accataacttcagcactttatactgctaaggaaaccatccccaaagaaactgcttcttct
acagcacatttatgggaaaagaaggatacaaaagatttaaatatgtggtttcttgaagaa
ccaaatgaagctgtaaaaagagctcccatgcctgaattggtacccaaaggagagataata
aaaatgaacattgattctatttttctggttcttgaggctggaattggtcatagaacagta
cctatgctattggcaaaatcacgtttctcaggggaaggcaaaaactggagttccttaata
aatctccactgtcagcttgagctagaagtacattattacaatgaaatgtttggtgtgtgg
gagcctttgcttgaacccttagaaattgatcagactgaggattttagaccatggaatctt
ggaatcaagatgaaaaagaaagccaaaaaggccattgttgagtcaggtactgaagaagaa
aattacagagtaccagaatacaaaactgtcatcactttctattcgaaagaccagctaaac
attacattatctaaatgtggccttataatgttaaataatttagctgaggcatttacagaa
gctgccactggatcttcagctaccttcataagggatctggcaccttttatgattttaaat
tctcttggacttagtatttctgtttcaccaagtgaatcttttagtgtactcaacgtacct
atggcaaaatcatatgtattgaaaaatgaggagagtttaagtatggattatatgcgaact
aaagacaatgatcatttcaatgcaatgaccagcctaagcagcaaacatttcttcattctt
cttacccctgctaaccactctactgctgataaaatccctttaacaaaagtgggacgacga
ctgtacactgtaagacacagagagtctggagttgaaagatcaattgtttgtcagattgat
gcagtggaaggaagtaagaaggtaacagttcgctctccagtgcagattagaaatcatttt
tcaataccactttctgtttatggaggagacacgttattgggaacggcctcacctggaagt
gaatttaacataccattagcatcttaccgatcactactttctctgaagccagaagatgca
gactatcagatgtgtgaaggaattgactttgaagaaattataaaacaagatggtacttct
ttcaagaaaaaatgtagacctataaacccttccaggaagccatttatcattaatatagtc
ccagaaaaagataatttgacatatatgtcagtgtattcagaagaccgttgggacttacca
tatataatacatttgtggccacctattctactccgaaatcttcttccttacaaaattgct
tattacatagaggggattgaacatagagtttttactctccatgaaggccgttcagcccag
ctttgtactgtacagttggataaagccaggctacatttaaaattacttgactatcttaat
catgattggaaaagtgaatatcatataaaacctaatcaacaagatattagtttcatcagt
tttacttgtgttacagaaatagaaaagactgatttagatattgctgtccatgtgacttat
aatactggccagactattatggcatttcatagtccttattggatggttaataaaactggt
cgaatgttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaag
ccagttctcttttcatttcagccaaagcactttttcaataacaataaggttcagcttatg
gtaactgatagtgaattgtcagatcaattttcaattgatacagttggtagtcatggagcg
gttaaatgtaaaggcccaaaaatggaatatcaagttggtgtcactatagaccttagcagt
tttaacattaccagaattgtcacatttacccccttttttttgattaaaaacaaaagcaaa
tatcatatatcagtggctgaagagggaaatgataaatggctcgctcttgatttggagcag
tgtgtccccttttggcctgaggatgcttctaataaacttcttattcgagttgaaagaagt
gaaagccctccccataagatacattttaataaggaagaaagttgtattttactgcgtcta
gacaacgagcttggaggtattatagcagaagttaatttggctgagcattctacagttatt
acattttcagattatcgtgatggagccgctacatttctgttaataaatcacaccaagaat
gacattgttcagtataagcaaagttccctcagtgaaatagaagattccctccctcctgga
aaagcagtattttatacatgggctgatccagtgggctctagaaagctgcagtggaaatgt
ggaaaaagccacggtgaagtaacacaaaaggatgatatgatgacacctataaatttgggg
aaaacgaccatttatttagtttcattttttgaaggcttacaacgcataattttattcact
gaagatccaagagtatttaaagtgacatatgaaagtgagaaagcagagttagcagagcaa
gaaattgtgttggcgttacaagatgttgggatttctcttgtcaacaattatacaaagcaa
gaagtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaggaag
aaggcaagatggaagccaatgagtgtaaagcacactgagaagttagagaaggaatttaag
gaatatgttgaatcttcaccatcagaagataaggttattgagttggacaccaacattctg
gttcgcttcacacctggtgcttctaacatgaaaattctgcagccacatgtaatagctata
agaagaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcg
tttagaattcaaatttatagaatacagatccaaaaccaaatacatggtgctatatttcca
ttcgtgttttatcccattaaaccgcccaagtccgtcaccttggattcagcaccaaaaccc
tttactgatgtcagtattgtcatgagatctgcaggacattcgcagatatcacgtattaag
tatttcaaagtgttgatccaagaaatggatctcaggttagatcttggatttgtctatgct
gtatcagaacttatgacaccagctgaagtcactgaaaaaacagaggttgagctttttcat
aaagacatagaagctttccaagaagaatataaaatagtctcattagtagattcatcacaa
gtcagtctctatgaatactttcatatatctcctatcaagttgcatttaagtgtttcactg
agttcaggtggtgaagaaccgaaagattcagaacagcatgaaggactgatggcaattcgt
tctttacatcttttgctgaagagtattggtgccactctcacagatgtacaagatgtagtt
tttaagctagcattttttgaactcaattatcagttccatacaacagctgaactacagtct
gaagtaataagacactattcaaagcaggccattaaacagatgtacgtactcattcttgga
cttgatgttttgggaaatccctttggcttgataagagaattttctgaaggtgtagaagca
tttttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaaggaatg
gcactaggactgaaagcactagttggtggagctgttggtggactagctggtgctgcctcc
aaaatcaccagtgctatggctaaaggggtggcagctatgactatggatgaagactaccaa
cagaagagaagagaagccatgaataagcaaccagctggtcttagggaaggcatcactcgt
ggaggaaaaggcctagtttctggttttgtaagtggcataacaggaattgttacaaaacca
atcaaaggagctcagaaagaaggagcaactggtttctttaaaggtgttgggaaaggttta
gttggagcagtgacaaggccaactggaggcatcatagacatggctagcagtacatttcag
ggaataaaaagagctacagagacctctgatgaagtggagagtctgcgaccccctagattc
tttaatgaagatggagttatcagaccttacagattgagggatggtactggaaatcaaatg
ttacaggtcatggaaaacggaagatttgcaaaatacaaatattttacccatgtcatgatc
aataagacagacatgttaatgattaccagaagtggtgtgttgtttgtaacaaaaggaaca
tttggacagcttacttgtgagtggcaatatagttttgatgagtttaccaaagagccattc
attgttcatgagagaagactacgcatcgaagcaaaggaacgggtgaagtctgtattccat
gccaaagagtttggaaaaatagttaacttcagaaccccggaggatgcgaggtggatcctc
agaaagctagaagaagcaagagaaccttccccgaacctctga
DBGET
integrated database retrieval system
