Bos mutus (wild yak): 102286954
Help
Entry
102286954 CDS
T02919
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X2
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
bom
Bos mutus (wild yak)
Pathway
bom03250
Viral life cycle - HIV-1
bom04623
Cytosolic DNA-sensing pathway
bom05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102286954 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102286954 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102286954 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bom03400
]
102286954 (SAMHD1)
DNA repair and recombination proteins [BR:
bom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102286954 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
102286954
NCBI-ProteinID:
XP_005896071
LinkDB
All DBs
Position
13:complement(50238241..50305640)
Genome browser
AA seq
589 aa
AA seq
DB search
MQSADSQNTPKRPRRDGSPRTPPDSSPADAETSPSHDLDPDYRTWGPEQVWSFLRRCGFS
DSELLKRCREKRMSGSLLPFPEDLGISSYGKKMKLLNCIQDTMKVINDPIHGHIEFHPLL
MRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGRLVRELSEKQPELQIS
ERDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEIKWTHEQGSVMMFEHLINSNGLQD
VMKYYGLIPEEDILFIKEQITGPPESPIKDASKWLYKGRPKEKSFLYEIVANKRNGIDVD
KWDYFARDCHHLGIQNSFDYKRFLKFARVCEVDNMKHICTREKEVGNLYDMFHTRNCLHR
RAYQHKVGNIIDTMITDAFLKADDHIEITGSAGRKYRISTAIDDMEAFTKLTDNIFLEIL
YSTDPNLNDARMILKKIESRNLYKFVGETQPMIQRIKKENYEHLPNEVASAKPSDVELEA
ELKAEDLIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAVMITRNQVSQFLPETFAEQLIR
VYCKKTDEKTLFAARQHFVHWCLINDFTKPQIKKLPLRKSKKELTTATG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgccgactcccagaacacccccaagcggccccggcgcgatggcagcccaaga
acgccgccagactcctctcccgcagacgcagagacgtccccgagccacgatctcgacccg
gactaccgaacctggggcccggagcaggtgtggtccttcctaaggcgctgtggcttcagc
gattcggaactgctgaaacgctgccgagagaagagaatgtcaggttcgttactgcccttt
cctgaagatcttggaataagttcctatgggaagaaaatgaagctgcttaattgtatccaa
gatacaatgaaggtgatcaatgatcctatccatggccacattgaatttcaccctctcctc
atgcgaatcatcgacacaccacaatttcagcgcctgcgatacatcaagcagttgggaggc
ggttactatgtttttccaggagcttcacacaatcgatttgagcacagtctaggcgtgggg
tatctagcaggacgtctagttcgtgaactgagtgaaaaacaaccagagctgcagataagt
gaacgagatattctctgtgttcagatcgctggtctttgtcatgatcttggtcatgggcca
ttttctcatatgtttgatggaagatttattccacttgctcgaccagagataaaatggacg
catgaacagggctcagttatgatgtttgagcacctcatcaattctaacggactccaagat
gtcatgaaatactatggtctcatccctgaagaagatattttgtttatcaaggaacaaatt
acaggaccacctgaatcacccatcaaagatgcttcaaagtggctctataaagggcgtcct
aaagaaaaaagcttcctttatgagatagtggccaataaaagaaatggcattgatgtggac
aaatgggattattttgccagggactgccatcatcttggaatccaaaatagctttgattac
aagcgctttcttaagtttgcccgtgtctgtgaagtagataatatgaagcatatttgtact
agagaaaaggaggttggaaacctgtatgacatgttccacacacgcaactgtttgcaccgc
agagcttatcaacacaaagttggcaacatcattgatacaatgattacagatgccttcctc
aaagcagacgatcacatagagataacaggttctgcaggaagaaagtatcgcatttctaca
gcaattgatgacatggaagccttcactaagctgacagataacatttttctggagatctta
tactccactgatcccaacctgaatgatgcacggatgattttaaagaaaattgaatcccgt
aatctatacaagtttgtgggtgagactcagcccatgatacaaagaattaaaaaggaaaac
tatgaacaccttccaaatgaggtcgccagtgcgaaacccagtgatgtagagctagaagct
gaactgaaggctgaagatttgatagtggatgttatcaacatggattatgggatggaagac
aagaatcctattgatcatgttcgcttctattgtaagagtgacctcagcaaggcagtcatg
attactagaaaccaggtttctcagtttttgccagagacatttgctgagcagctgattcga
gtttactgtaagaagacagatgaaaagactctgtttgctgcacgacagcatttcgtccat
tggtgcttaatcaatgacttcaccaagccacagataaagaaactgccactcagaaaatcg
aagaaggagctaaccacagccacaggataa
DBGET
integrated database retrieval system
