Bos mutus (wild yak): 102288153
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Entry
102288153 CDS
T02919
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
bom
Bos mutus (wild yak)
Pathway
bom04612
Antigen processing and presentation
bom05145
Toxoplasmosis
bom05152
Tuberculosis
bom05164
Influenza A
bom05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
102288153 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102288153 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
102288153 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
102288153 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
102288153 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bom01001
]
102288153 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bom04054
]
102288153 (CIITA)
Enzymes [BR:
bom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102288153 (CIITA)
Protein kinases [BR:
bom01001
]
Serine/threonine kinases: Other
TAF1 family
102288153 (CIITA)
Pattern recognition receptors [BR:
bom04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102288153 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
AAA_22
Motif
Other DBs
NCBI-GeneID:
102288153
NCBI-ProteinID:
XP_070218798
LinkDB
All DBs
Position
25:complement(32424826..32484327)
Genome browser
AA seq
1206 aa
AA seq
DB search
MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLT
LLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSAD
PLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDTQLEGLSKDIFIEHIGLEEMISESVEVLEEAGQKSQKRPFPEELPVDLKHRKLAE
PLTMPVVTGTFLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPA
GPIQIIRTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRP
GSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQS
LRDKYQAQPTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAA
SDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYR
LQDLLSSLGPQPLPVDDEVLSYIARRPNRILLILDGFEDLEAHDGSLHSTGGPGSAEPRS
LRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKVDALFEVAGFSAQQVETYVRRYFES
EGTAEHQERALALLQARPFLLSHSHSPTVCRTVCQLAEALLQRSDEAQLPSTLTGLYVGL
LGPAARDGPPGALAELARLAWELGRAHQRGLKAGCLPSAEARAWAVAQGWLRPTPGAPET
ELAFSSFLLQCFLGAVWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQ
PRAGCLGALAGPAATTSADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQH
VLQGLPARLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTR
FRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSS
EAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGV
AQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCICDAGAESL
AHALPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLD
PRIILR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagaccatcctgtctcaggtccggatgttgctctctagccatcggccg
agccaagtgcaggcgcttctggacaacctgctggcggaagagctcctctccagggagtac
caccatgccctgctccatgagtctgatggtgaggctctggccaggaagatctccttgacc
ctgctggagaaaggagatccagacttcgccctcttggggtggatctggagtgggctgcag
gcccccacggcagagaggggccccagctacaaggaccctggtggcagtggacagtgccca
accatggagctggggcctctagaaggcagttacttagaacttctcaacagcagtgctgac
cctttgcagctctaccacctctacgaccggatggatctgacaggagaagaagaaatagag
ctctgctcagagcctgacacagacaccatcaactgcgaacagttcagcaggctgttgtgt
gacatggaaggtgatgaagagaccagggaagcttatgccaatatcgcggaattggaccag
tacgtcttccaggacacccagctggagggcctgagcaaagacattttcatcgagcacata
ggattggaagaaatgatcagcgagagcgtggaggtgctggaggaggcagggcagaaaagt
cagaagagacccttcccagaggagctgcctgtggatctgaagcaccggaagctagccgag
cccctcaccatgcccgtggtgactggcactttcctggtggggccagtgagcgactccttg
gttcagccctgcccgccacctcctgctctgttcaacacggagccagcatccagccagacc
cggctgaaggacgcagcgcctccatccagttccttgttgagctgcctgagtcttcccgcg
ggacccattcagattatccgcactctccccactctgccccaggggctctggccgatctca
gggactgggacgggggtctccagtatactcatctaccaaagtgagatgcccccggccagc
caaacacccccatccagcgggcctgctgtccagagccttcccaagtccccagaccggcct
ggctctgccagcccctttgccccgtctgccgctgacctccccagcatgcccgaaccggcc
ctcacctcccgtgcaggcctgacagaggatgagatgtcccccaccaaatgcccagcagct
ggcggggcctccagcaaacttcccaagtggcctgagagcgtggagcagttctaccagtcg
ctacgggacaagtaccaggcccagcccaccggcccggaaggcaccctggtggacatggac
ctggtgagggtgaggctggagaagagcagcgggaagagccaggagagagagctggccacc
ctggactgggcagagcggcagccggcccgagggggtctggccgaggtgctgctggccgcc
agcgaccgccagcagccccgggagacgcgggtgatcgctgtgctgggcaaagcgggacat
gggaagagtcactgggcccgggccgtgagccgggcctgggcccacggccagctgccacag
tacgactttgtcttctgtgtcccctgccatcgtttggaccgtccggggacctcctaccgc
ctgcaggatctgctgtcctccctgggcccgcagccgttgccggtggacgacgaggtcctc
agttacattgcgaggaggcccaaccgcatcctgctcatcctggatggcttcgaggacctg
gaagcccacgatggctccctgcacagcacaggaggccccgggtcggcagagccccgctcc
ctccgggggctgctggcgggcctcctccagcgcaagctgctgcggggctgcaccctgctg
ctcacggcctggccccggggccgcctggcccagagcctgagcaaggtggacgccctgttt
gaggtggccggcttctcggcccagcaggttgagacctatgtgaggcgttactttgagtcg
gaggggaccgctgagcaccaagagagagccctggcgctcctgcaggcccggccgttcctc
ctgagccacagccacagccccaccgtgtgccggaccgtgtgccagctcgcggaggccctc
ctgcagcggagcgatgaagcccagctgccctccacgctcacgggcctctacgtgggcctg
ctaggcccagcagctcgcgatggccccccgggggccctggcggaactggccaggctggcc
tgggagctgggccgtgcgcaccagaggggcctgaaggcgggctgtttaccgtcggcggag
gcgagggcctgggctgtggcccaaggctggttgcggcccaccccgggggccccggagacg
gagctggccttctccagcttcctcctgcagtgcttcctgggggccgtgtggctggctctg
agcagcgaaatcaaggacaaggagctgccgcagtatctggccttaaccccgaggaagaag
cggccctatgacaactggctggagggcgtgccgcgcttcttggtcggattggtcttccag
cctcgcgccggctgcctgggggccctggcagggccggcggccaccacgtcggcggacagg
aagcagaaggtgctcacgaggtacctgaagcgtctgcagcccgggacgctgcaggcgggg
cggctgctggagctgctgcactgtgcccacgaggcgctggaccccgggctctggcagcac
gtgctgcaggggctccctgcccgcctctccttcctgggcacacggctcacgcctcctgac
acccatgtgctgggcagcgccctggaggccgcgggccgagacttttccctggacctccgc
agcactggcgtcgacgcctctggactggggagcctcgtgggactcagctgtgtcacccgt
ttcagggctgcattgagtgacactgtggagctatgggagtccctgcagcagcgtggggag
gccaagctactccgggcagtggaggagaagttcaccatcgagcctttcaaggccaagtcc
atgaaggatgtggaagaccttggcaatctcgtgcagatccagaggacaagaagctcctct
gaagcagcagctggggagctccctgctgtccgagacttaaagaagctggagtttgcgctg
ggccctgtcttgggcccacaggtttttcctaaactggtgaagatccttgaggcctttact
tcccttcagcatctagacctggactcgctgagcgagaacaagattggggacgagggtgtc
gcccagctctcagccaccttccctcagctgaaggccctggagacactcaacttgtcccag
aacaacatcaccgacgtgggtgcctgcaagctggccgaggctctgcccgcgctggccacg
tccctcctcaggctgagcttgtacaataactgtatctgcgacgcgggagccgagagcctg
gcgcacgcgcttccagacatggtgtccctccgggtgctggacgtccagtacaacaagttc
acagccgctggggctcagcagcttgccgctggcctgagaaagtgccctcaggtgaagaca
ctggcgatgtggacgcccaccatcccctttggcgtccaggaacacctgcagcagctggac
ccacgaatcattctgagatga
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integrated database retrieval system
