Bos mutus (wild yak): 138988244
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Entry
138988244 CDS
T02919
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bom
Bos mutus (wild yak)
Pathway
bom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138988244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bom03019
]
138988244
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138988244
mRNA degradation factors
5'-3' decay
Decapping complex
138988244
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
138988244
NCBI-ProteinID:
XP_070228821
LinkDB
All DBs
Position
6
Genome browser
AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAAVNEQSGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVXPPMPPRYPAPYGERMSPNQLCCV
PTSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRIGQMLPPAPGFRAFFSAPPPTTPPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHIRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEMQGDGPKKERTKLITPQVAKLEHTYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLFIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICCMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPPVTVTSLLQQL
MNLPQSAAAPAPSNPHLSAVLQNKFGLSLLLVVLSRGEDLQSSDAASELAQSNPWTEVMF
VATRELLRIPQTGLAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggcctgggagaggaggacgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaactggaagagaagcta
cctgcagcagttaatgaacaaagcggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggagaatctggcagagaggctcagcaagatggtgattgaaaatgaacttgaa
gacccagctatcatgagggcggtacagaccaggcccgtgttgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtgttagaatatgccttgcctcagaggcccccccag
ggcccagaagacgatcgggacctttccgagcgcgcattaccaaggcggtccacctcgcct
gtcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtgcccagcttcaaccagcagattctgtgtccaaagcctgtccacgttnnccccccaatg
ccgccacggtatcctgctccctatggtgagaggatgtctccaaaccagctctgctgtgtc
ccgacctcctccctgctgggccacccttttccccctagcgtccctcctgtcctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggattcgtgggcagcccacttgccgccatgaatcccaagctg
ttgcaagggcgaattgggcagatgctccccccggcgccaggcttccgcgccttcttcagc
gccccaccccccactacaccgccccctccacagcagcacccccctggcccaggaccccac
ctgcaaaacctaagatcacaggctccaatgtttagaccagacacaacccaccttcatcca
cagcaccgtcgacttttgcatcagagacagcaacagaatagaaatcaacatcggaatctc
aacggtgcaggagacagagggagtcaccggagcagtcatcaggatcatatccgaaaggat
ccgtatgccaaccttatgctgcagcgagaaaaagactgggtctctaaaatccagatgatg
caactgcaaagcactgatccctacctggatgatttttattatcagaattactttgaaaaa
ctggagaaactgtcagctgctgaagaaatgcaaggtgacggcccaaaaaaggagcgcacc
aagctcatcacgcctcaggtggccaaactggagcacacctacaagccagtgcagtttgag
ggctctttgggaaagctcactgtctctagtgtgaataatccccgaaaaatgattgatgct
gttgtgacgtctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaaaaga
cgaaaaacccttttcataattgagaaaacctatagtttactgcttgatgtggaggattac
gaaaggcgttatctcctaagtctggaagaagagcgacctgccctgatggatgaaagaaag
cacaaaatttgttgcatgtatgacaacttaagggggaaattgcctggacaggagaggccg
agtgatgaccactttgtacagatcatgtgtatccgaaaggggaagagaatggtagcccgg
attctgcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaac
ctccctttcctcatcaagaaggacgcacaggatgaggtgctgccatgcctattgagtccc
ttctctctcctcctctaccatcttccaccagtgaccgtcaccagccttctgcagcagctg
atgaacctacctcagagtgcagcggccccagctccgtccaacccgcacctctctgccgtg
ctccagaacaagtttggcctgtccctgctcctcgtcgtcctgagccgcggggaagaccta
cagagctcagacgccgcttcagaattggcgcaaagcaacccatggacggaggtgatgttt
gtggcaacccgagaacttttgcggattccccagacgggcctggccaagccaatctctata
cccacaaacctagtatccctcttttctcgttacgttgaccgacagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacggtaa
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